Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120719.seq
(702 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 27 0.23
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 27 0.23
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 2.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 3.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 4.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.6
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 8.6
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 8.6
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 26.6 bits (56), Expect = 0.23
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 288 LCVSNLICVRILLHRQHEVIVIFGYFFHVQQVAKREYKILRQ 163
L S L+C I ++ ++I+ Y+F +Q VA E + Q
Sbjct: 212 LSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKNMREQ 253
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 26.6 bits (56), Expect = 0.23
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 288 LCVSNLICVRILLHRQHEVIVIFGYFFHVQQVAKREYKILRQ 163
L S L+C I ++ ++I+ Y+F +Q VA E + Q
Sbjct: 88 LSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKNMREQ 129
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +2
Query: 2 GSAYRANVTDAPILFTCFATNWIGKLFQFCRCR*QSPT 115
G Y + T PIL+ + + + CRC +P+
Sbjct: 302 GCLYYFSTTINPILYNVMSAKYRNAFKETCRCSPSNPS 339
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 144 QRPNQMRFKPVGDCY 100
+R Q+R K +GDCY
Sbjct: 310 ERFEQLRIKILGDCY 324
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -1
Query: 204 VQQVAKREYKILRQKFLLRHQ 142
VQQ ++EY+ L++K +L ++
Sbjct: 45 VQQEREQEYEKLKRKMILEYE 65
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 204 VQQVAKREYKILRQKFLLRHQ 142
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 204 VQQVAKREYKILRQKFLLRHQ 142
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 204 VQQVAKREYKILRQKFLLRHQ 142
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 204 VQQVAKREYKILRQKFLLRHQ 142
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 204 VQQVAKREYKILRQKFLLRHQ 142
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 204 VQQVAKREYKILRQKFLLRHQ 142
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 204 VQQVAKREYKILRQKFLLRHQ 142
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 204 VQQVAKREYKILRQKFLLRHQ 142
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 505 SSCTRPSR 482
SSCTRPSR
Sbjct: 14 SSCTRPSR 21
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 505 SSCTRPSR 482
SSCTRPSR
Sbjct: 14 SSCTRPSR 21
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,105
Number of Sequences: 438
Number of extensions: 4533
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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