Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120713.seq
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.77 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   5.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = +2

Query: 239 KVQIYYKKINSNLYKIVFEVAYKNFNDDSDVVQVECFVNAKTLMNLFKNNIKGSDDINEV 418
           K Q+        + K  FEV Y     D  VVQ     + KTL+++ K  ++  +D  E 
Sbjct: 488 KEQVANSSFVERVKKRGFEVVYMTEPIDEYVVQQMKEFDGKTLVSVTKEGLELPEDEEEK 547

Query: 419 FKYLKD 436
            K  +D
Sbjct: 548 KKREED 553


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 610 SRSNKRVASYNVNMLKSDWEENDMSDN 690
           S SN R  + N N   + W +N+ +DN
Sbjct: 370 STSNNRWHNNNGNNSNNHWRKNNPNDN 396


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 487 QWSKRVHDWNVVNST 531
           +W K V DW VV++T
Sbjct: 108 RWPKFVKDWCVVDAT 122


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 487 QWSKRVHDWNVVNST 531
           +W K V DW VV++T
Sbjct: 108 RWPKFVKDWCVVDAT 122


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 350 VNAKTLMNLFKNNIKGSDDINEVFKYLKDNENQI 451
           V A  + NL K  I G+D +NE    +  + N+I
Sbjct: 166 VVALVVKNLIKPTILGADWLNEQRAVIDFDNNEI 199


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
          growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 6  IMSDNKIQEYYGDSQSFKDMEEGKCYDIS 92
          + +DNK+  YY     F+D  +GK +D++
Sbjct: 15 VAADNKVVCYYNSKAYFRD-GQGK-FDVN 41


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 54  KIANRRSIPESC 19
           K+ NRR+ P SC
Sbjct: 189 KVENRRNSPNSC 200


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 435 SFKYLNTSLMSSDPFILFLNRFISVFA 355
           SF+Y+N S + +   + F+N    V +
Sbjct: 4   SFQYINRSELITSKIVSFVNSIFLVMS 30


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 54  KIANRRSIPESC 19
           K+ NRR+ P SC
Sbjct: 137 KVENRRNSPNSC 148


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 54  KIANRRSIPESC 19
           K+ NRR+ P SC
Sbjct: 320 KVENRRNSPNSC 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,497
Number of Sequences: 336
Number of extensions: 3443
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)