Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120713.seq
         (691 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    28   0.096
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    28   0.096
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   1.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   2.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.4  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.096
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
 Frame = +2

Query: 230 YYCKVQIYYKKINSNLYKIVFEV-------AYKNFNDDSDVVQVECFVNAKTLMNLFKNN 388
           Y+ +  +  + +N N++    E        A  NF+++  +V ++ F N    +N+F NN
Sbjct: 474 YFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNN 533

Query: 389 IKGSDDINEV 418
              + DI  +
Sbjct: 534 F--NSDIKSI 541


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.096
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
 Frame = +2

Query: 230 YYCKVQIYYKKINSNLYKIVFEV-------AYKNFNDDSDVVQVECFVNAKTLMNLFKNN 388
           Y+ +  +  + +N N++    E        A  NF+++  +V ++ F N    +N+F NN
Sbjct: 474 YFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNN 533

Query: 389 IKGSDDINEV 418
              + DI  +
Sbjct: 534 F--NSDIKSI 541


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 520 VNSTRIELCEAKENEAYSNLQNCTNAR 600
           +   RI+  + KENE Y+NL    + +
Sbjct: 325 ITPKRIQYAQHKENELYANLMKIVHEK 351


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 520 VNSTRIELCEAKENEAYSNLQNCTNAR 600
           +   RI+  + KENE Y+NL    + +
Sbjct: 363 ITPKRIQYAQHKENELYANLMKIVHEK 389


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 559 NEAYSNLQNCTNARINISRSNKRVASYNVNMLKSD 663
           N    N+QN  N   N  ++NK+ A+   N  ++D
Sbjct: 417 NNQNDNIQNTNNQNDNNQKNNKKNANNQKNNNQND 451


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 407 INEVFKYLKDNENQIFTIYNIKCQQIFNG 493
           IN +FK +   E +  T      ++++NG
Sbjct: 412 INNIFKNMSQIEREAITFQYTDWEEVYNG 440


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 407 INEVFKYLKDNENQIFTIYNIKCQQIFNG 493
           IN +FK +   E +  T      ++++NG
Sbjct: 412 INNIFKNMSQIEREAITFQYTDWEEVYNG 440


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 199 TNILKTKIASILL*STNLLQENQQQF 276
           TNI    +A +   + +LLQ NQQ F
Sbjct: 893 TNIGGKPVAVVKSSAQSLLQSNQQHF 918


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,162
Number of Sequences: 438
Number of extensions: 3698
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)