Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120712.seq
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   1.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.9  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   6.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 81  IQQHSNRNKSSAPSXFNSKCRHCRRCASNGGRAVTXI 191
           +Q H N +  + P     +C+HC  C +  G  +  I
Sbjct: 170 LQNHVNTHTGTKPH----RCKHCDNCFTTSGELIRHI 202


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 256  NNCYSPFKWIFPST 297
            NNC++P KW + S+
Sbjct: 2758 NNCWNPLKWDWRSS 2771


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/50 (20%), Positives = 23/50 (46%)
 Frame = +1

Query: 274 FKWIFPSTYXXRFVMXSLXWLGIILMTMATTXGLSSXXSCLPVPVRKIQT 423
           F+W+F      +F+  ++ W  +IL    T    +    C+ + +  ++T
Sbjct: 282 FRWVF----FVQFIQCTMIWCSLILYIAVTGFSSTVANVCVQIILVTVET 327


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,933
Number of Sequences: 2352
Number of extensions: 9847
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)