Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120711.seq
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro... 108 6e-24
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ... 108 6e-24
U57758-1|AAB49932.1| 360|Drosophila melanogaster putative thyro... 30 3.4
AY071174-1|AAL48796.1| 195|Drosophila melanogaster RE22911p pro... 30 3.4
AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p pro... 30 3.4
AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9 signalo... 30 3.4
AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P... 30 3.4
AE014297-892|AAF54348.1| 195|Drosophila melanogaster CG9740-PA ... 30 3.4
AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB... 30 3.4
AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA... 30 3.4
AE014297-202|AAF52054.1| 562|Drosophila melanogaster CG1113-PA ... 29 6.0
>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p
protein.
Length = 1000
Score = 108 bits (260), Expect = 6e-24
Identities = 42/84 (50%), Positives = 69/84 (82%)
Frame = +3
Query: 255 EQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEA 434
+Q+LL +Q +++ LRRK+C+VV+E+ARN ID+D NNQWP+ LQF+F CA++ P ++E+
Sbjct: 88 QQILLAVQQEVTPQLRRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQLQES 147
Query: 435 GIRMFTSVPGVFGNRQTENLDVIK 506
+R+F+SVP +FGN++ + +D+IK
Sbjct: 148 ALRIFSSVPSIFGNQEAQYIDLIK 171
Score = 85.4 bits (202), Expect = 6e-17
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +1
Query: 7 EAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLR 186
+A F QLL +LLSTDND+R QAE+AYNN+ E KV HL+ +IQN +E+ RQ AAVLLR
Sbjct: 5 QAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAVLLR 64
Query: 187 RLFS 198
RLF+
Sbjct: 65 RLFT 68
Score = 55.6 bits (128), Expect = 6e-08
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = +2
Query: 503 KRMLISALQPNESMALRTQAVKAVGAFILLHDK--EPIIQKHFSDVLLPLMQVIVLSIEA 676
K+ML ++ +R QAV+AVGAFIL HDK E I KHF+D+L ++ + +IEA
Sbjct: 171 KQMLAKSMDAGSDPEVRVQAVRAVGAFILYHDKENETAIHKHFADMLPRMIHITGETIEA 230
Query: 677 ADD 685
DD
Sbjct: 231 QDD 233
>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
protein.
Length = 1105
Score = 108 bits (260), Expect = 6e-24
Identities = 42/84 (50%), Positives = 69/84 (82%)
Frame = +3
Query: 255 EQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEA 434
+Q+LL +Q +++ LRRK+C+VV+E+ARN ID+D NNQWP+ LQF+F CA++ P ++E+
Sbjct: 88 QQILLAVQQEVTPQLRRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQLQES 147
Query: 435 GIRMFTSVPGVFGNRQTENLDVIK 506
+R+F+SVP +FGN++ + +D+IK
Sbjct: 148 ALRIFSSVPSIFGNQEAQYIDLIK 171
Score = 85.4 bits (202), Expect = 6e-17
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +1
Query: 7 EAQFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLR 186
+A F QLL +LLSTDND+R QAE+AYNN+ E KV HL+ +IQN +E+ RQ AAVLLR
Sbjct: 5 QAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAVLLR 64
Query: 187 RLFS 198
RLF+
Sbjct: 65 RLFT 68
Score = 55.6 bits (128), Expect = 6e-08
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = +2
Query: 503 KRMLISALQPNESMALRTQAVKAVGAFILLHDK--EPIIQKHFSDVLLPLMQVIVLSIEA 676
K+ML ++ +R QAV+AVGAFIL HDK E I KHF+D+L ++ + +IEA
Sbjct: 171 KQMLAKSMDAGSDPEVRVQAVRAVGAFILYHDKENETAIHKHFADMLPRMIHITGETIEA 230
Query: 677 ADD 685
DD
Sbjct: 231 QDD 233
>U57758-1|AAB49932.1| 360|Drosophila melanogaster putative thyroid
receptor interactingprotein protein.
Length = 360
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 13 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AY071174-1|AAL48796.1| 195|Drosophila melanogaster RE22911p
protein.
Length = 195
Score = 29.9 bits (64), Expect = 3.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 105 KSSAPSEFNSKCRHCRRCASN 167
K P ++ + C HCR+C SN
Sbjct: 32 KDGEPKKYRALCTHCRKCQSN 52
>AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p
protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 13 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9
signalosome subunit 2 CSN2 protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 13 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA,
isoform A protein.
Length = 1357
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 78 RIQQHSNRNK-SSAPSEFNSKCRHCRRCASNGGRAVTKII*CRI 206
+++QH+N N +S PS RHC RC + GR + CR+
Sbjct: 10 QLEQHNNHNAHTSDPS------RHCARCTTELGRITNRGAPCRV 47
>AE014297-892|AAF54348.1| 195|Drosophila melanogaster CG9740-PA
protein.
Length = 195
Score = 29.9 bits (64), Expect = 3.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 105 KSSAPSEFNSKCRHCRRCASN 167
K P ++ + C HCR+C SN
Sbjct: 32 KDGEPKKYRALCTHCRKCQSN 52
>AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB,
isoform B protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 13 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA,
isoform A protein.
Length = 444
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 13 QFYQLLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
++ L N L+ + N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014297-202|AAF52054.1| 562|Drosophila melanogaster CG1113-PA
protein.
Length = 562
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 4 HEAQFYQLLNTLLSTDNDIRSQAEDA 81
H +FY L +L ST ++RSQA A
Sbjct: 80 HRVEFYSTLESLRSTSRELRSQAATA 105
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,208,076
Number of Sequences: 53049
Number of extensions: 628714
Number of successful extensions: 1429
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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