Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120703.seq
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.6  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.7  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   9.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   9.7  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 354 Y*SKLFVLTERVNGFTTKKNNVSKLITKKDLIIYNKITN*EVI 226
           Y  +LF+L + V     + N+  KLI K  + I  +    EVI
Sbjct: 299 YGLELFILAKIVTDLCQEANSTKKLIVKIKIDIDKEDERNEVI 341


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 408 LQKYFYTKNSTPRVQLRLLVVVNIFIKYRLL 500
           L KY   K+S P++ L     + + + Y+LL
Sbjct: 32  LNKYLLVKHSKPKMPLLPKTPLPLTLLYKLL 62


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 427 QKTLRLGSNCDYWL 468
           QKTL + +   YWL
Sbjct: 235 QKTLNVAAGIQYWL 248


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -2

Query: 553 ESTTGSETRPTEKIREKLSSL 491
           E  TG++   T++ +EKL++L
Sbjct: 1   EEGTGADRLMTQRCKEKLNTL 21


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 427 QKTLRLGSNCDYWL 468
           QKTL + +   YWL
Sbjct: 236 QKTLNVAAGIQYWL 249


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 427 QKTLRLGSNCDYWL 468
           QKTL + +   YWL
Sbjct: 236 QKTLNVAAGIQYWL 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,670
Number of Sequences: 336
Number of extensions: 2252
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)