BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120700.seq (687 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 28 6.7 At5g19450.2 68418.m02318 calcium-dependent protein kinase 19 (CD... 27 8.8 At5g19450.1 68418.m02317 calcium-dependent protein kinase 19 (CD... 27 8.8 >At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 455 Score = 27.9 bits (59), Expect = 6.7 Identities = 14/46 (30%), Positives = 28/46 (60%) Frame = +2 Query: 98 IKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKK 235 I+T ++EN +D+ + ++KLK ++ + S YG+ +N NK+ Sbjct: 28 IRTHMNENSADSDEDEADKLKMIDENGGQSS---YGLRENPKKNKR 70 >At5g19450.2 68418.m02318 calcium-dependent protein kinase 19 (CDPK19) identical to calcium-dependent protein kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655 Length = 533 Score = 27.5 bits (58), Expect = 8.8 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +2 Query: 497 VLQIISIC-KNGVMVRRDEKSRVFIVKNEPNIEYLKA 604 +L+++ IC K+GVM RD K F+ N+ LKA Sbjct: 165 ILEVVQICHKHGVM-HRDLKPENFLFANKKETSALKA 200 >At5g19450.1 68418.m02317 calcium-dependent protein kinase 19 (CDPK19) identical to calcium-dependent protein kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655 Length = 533 Score = 27.5 bits (58), Expect = 8.8 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +2 Query: 497 VLQIISIC-KNGVMVRRDEKSRVFIVKNEPNIEYLKA 604 +L+++ IC K+GVM RD K F+ N+ LKA Sbjct: 165 ILEVVQICHKHGVM-HRDLKPENFLFANKKETSALKA 200 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,499,517 Number of Sequences: 28952 Number of extensions: 194346 Number of successful extensions: 477 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 477 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1457719448 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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