Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120696.seq
(687 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 92 1e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 89 7e-17
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 89 7e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 82 1e-14
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 81 3e-14
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 79 8e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 79 8e-14
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 79 8e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 79 8e-14
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 77 4e-13
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 77 4e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 76 7e-13
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 76 7e-13
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 76 9e-13
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 76 9e-13
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 76 9e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 75 1e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 75 1e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 74 3e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 74 4e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 73 5e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 71 2e-11
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 70 5e-11
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 68 2e-10
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 68 2e-10
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 67 3e-10
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 67 4e-10
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 66 6e-10
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 66 8e-10
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 66 8e-10
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 66 8e-10
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 66 8e-10
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 64 3e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 62 9e-09
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 58 2e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 58 2e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 58 3e-07
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 57 4e-07
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 57 5e-07
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 56 6e-07
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 54 3e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 52 1e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 50 4e-05
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 49 1e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 2e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 48 2e-04
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 48 3e-04
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 48 3e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 47 5e-04
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 46 7e-04
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 44 0.005
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 44 0.005
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 43 0.006
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 43 0.006
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 42 0.014
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.033
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 40 0.043
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 40 0.057
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 40 0.057
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 40 0.057
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 40 0.057
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 40 0.075
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.099
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 39 0.13
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 39 0.13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 39 0.13
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 38 0.23
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 38 0.30
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 37 0.40
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 37 0.53
UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 36 0.70
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 36 0.93
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 36 0.93
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 35 1.6
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 35 1.6
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 35 1.6
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 35 2.1
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 2.8
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 34 2.8
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 34 3.7
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 34 3.7
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 34 3.7
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 34 3.7
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 33 4.9
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 33 6.5
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 33 6.5
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 33 8.6
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 8.6
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/57 (77%), Positives = 46/57 (80%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
DQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILY HLF
Sbjct: 176 DQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF 232
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/64 (68%), Positives = 46/64 (71%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHL
Sbjct: 90 AFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHL 149
Query: 435 AGIS 446
AGIS
Sbjct: 150 AGIS 153
Score = 85.8 bits (203), Expect = 9e-16
Identities = 46/85 (54%), Positives = 47/85 (55%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 180
YSTNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 5 YSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIF 64
Query: 181 XXXXXXXXXXXXN*LVPLILGAPDM 255
N LVPL+LGAPDM
Sbjct: 65 FMVMPIMIGGFGNWLVPLMLGAPDM 89
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 89.4 bits (212), Expect = 7e-17
Identities = 42/57 (73%), Positives = 45/57 (78%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
DQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILY HLF
Sbjct: 152 DQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF 208
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/64 (68%), Positives = 46/64 (71%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHL
Sbjct: 66 AFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHL 125
Query: 435 AGIS 446
AGIS
Sbjct: 126 AGIS 129
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/53 (60%), Positives = 34/53 (64%)
Frame = +1
Query: 97 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDM 255
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPDM
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDM 65
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 89.4 bits (212), Expect = 7e-17
Identities = 42/65 (64%), Positives = 49/65 (75%)
Frame = -3
Query: 448 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 269
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 268 IRGNA 254
IRGNA
Sbjct: 138 IRGNA 142
Score = 84.2 bits (199), Expect = 3e-15
Identities = 47/93 (50%), Positives = 54/93 (58%)
Frame = -2
Query: 305 KGGG*ESKSYIIYSWECISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 126
K GG + +SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 125 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 27
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = -1
Query: 681 NKCXYKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKG 520
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSG 53
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILY HLF
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLF 154
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = +3
Query: 258 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 437
FPR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+A
Sbjct: 13 FPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMA 72
Query: 438 GI 443
G+
Sbjct: 73 GV 74
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILY HLF
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLF 238
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL
Sbjct: 96 AFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHL 155
Query: 435 AGIS 446
+G+S
Sbjct: 156 SGVS 159
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXX 174
+STNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 9 FSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLM 68
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N VP+++GAPDM
Sbjct: 69 IFFMVMPAMIGGFGNWFVPILIGAPDM 95
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 79.4 bits (187), Expect = 8e-14
Identities = 41/85 (48%), Positives = 46/85 (54%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 180
+STNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 9 FSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIF 68
Query: 181 XXXXXXXXXXXXN*LVPLILGAPDM 255
N LVPL++GAPDM
Sbjct: 69 FMVMPIMIGGFGNWLVPLMIGAPDM 93
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/64 (62%), Positives = 44/64 (68%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHL
Sbjct: 94 AFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHL 153
Query: 435 AGIS 446
AGIS
Sbjct: 154 AGIS 157
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/56 (66%), Positives = 40/56 (71%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF
Sbjct: 181 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLF 236
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 79.4 bits (187), Expect = 8e-14
Identities = 39/64 (60%), Positives = 43/64 (67%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHL
Sbjct: 76 AFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHL 135
Query: 435 AGIS 446
AG+S
Sbjct: 136 AGVS 139
Score = 75.8 bits (178), Expect = 9e-13
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 524 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILY HLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +1
Query: 97 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDM 255
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPDM
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDM 75
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 79.4 bits (187), Expect = 8e-14
Identities = 37/56 (66%), Positives = 42/56 (75%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY HLF
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Query: 435 AGIS 446
+GIS
Sbjct: 153 SGIS 156
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N LVP+++GAPDM
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 79.4 bits (187), Expect = 8e-14
Identities = 37/56 (66%), Positives = 42/56 (75%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY HLF
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Query: 435 AGIS 446
+GIS
Sbjct: 153 SGIS 156
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N LVP+++GAPDM
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 180
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 181 XXXXXXXXXXXXN*LVPLILGAPDM 255
N LVPL++GAPDM
Sbjct: 68 FMVMPVMIGGFGNWLVPLMIGAPDM 92
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHL
Sbjct: 93 AFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 152
Query: 435 AGIS 446
AG+S
Sbjct: 153 AGVS 156
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/56 (64%), Positives = 40/56 (71%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF
Sbjct: 180 QTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLF 235
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 180
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 181 XXXXXXXXXXXXN*LVPLILGAPDM 255
N LVPL++GAPDM
Sbjct: 68 FMVMPILIGGFGNWLVPLMIGAPDM 92
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/56 (66%), Positives = 40/56 (71%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF
Sbjct: 180 QTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLF 235
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHL
Sbjct: 93 AFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 152
Query: 435 AGIS 446
AG+S
Sbjct: 153 AGVS 156
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 76.2 bits (179), Expect = 7e-13
Identities = 38/64 (59%), Positives = 43/64 (67%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHL
Sbjct: 94 AFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHL 153
Query: 435 AGIS 446
AG+S
Sbjct: 154 AGLS 157
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILY HLF
Sbjct: 181 RIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLF 236
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/85 (40%), Positives = 42/85 (49%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 180
+S NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIF 68
Query: 181 XXXXXXXXXXXXN*LVPLILGAPDM 255
N VPL++GAPDM
Sbjct: 69 FLVMPTMIGGFGNWFVPLMIGAPDM 93
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 76.2 bits (179), Expect = 7e-13
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILY HLF
Sbjct: 188 RIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLF 243
Score = 69.7 bits (163), Expect = 6e-11
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH+
Sbjct: 101 AFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHI 160
Query: 435 AGIS 446
+G S
Sbjct: 161 SGAS 164
Score = 59.3 bits (137), Expect = 9e-08
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
+STNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 14 FSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLM 73
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N LVP+++G+PDM
Sbjct: 74 IFFMVMPVMIGGFGNWLVPIMIGSPDM 100
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
D++ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILY HLF
Sbjct: 163 DKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLF 219
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
+FPR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHL
Sbjct: 77 SFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHL 136
Query: 435 AGIS 446
AG S
Sbjct: 137 AGAS 140
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1
Query: 97 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDM 255
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PDM
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDM 76
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 75.8 bits (178), Expect = 9e-13
Identities = 40/68 (58%), Positives = 44/68 (64%)
Frame = +3
Query: 243 STRYAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 422
+T AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 423 SLHLAGIS 446
+LHL IS
Sbjct: 150 ALHLTSIS 157
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY HLF
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLF 236
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPD 252
N L+PL++GA D
Sbjct: 67 IFFLVMPALIGGFGNYLLPLMIGATD 92
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 75.8 bits (178), Expect = 9e-13
Identities = 40/68 (58%), Positives = 44/68 (64%)
Frame = +3
Query: 243 STRYAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 422
+T AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 423 SLHLAGIS 446
+LHL IS
Sbjct: 150 ALHLTSIS 157
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY HLF
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLF 236
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPD 252
N L+PL++GA D
Sbjct: 67 IFFLVMPALIGGFGNYLLPLMIGATD 92
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHL
Sbjct: 82 AFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHL 141
Query: 435 AGIS 446
AGIS
Sbjct: 142 AGIS 145
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/81 (44%), Positives = 41/81 (50%)
Frame = +1
Query: 13 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 192
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 193 XXXXXXXXN*LVPLILGAPDM 255
N L+PL++GAPDM
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDM 81
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 643
Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 169 QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/85 (45%), Positives = 45/85 (52%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 180
+STNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIF 67
Query: 181 XXXXXXXXXXXXN*LVPLILGAPDM 255
N LVPL++GAPDM
Sbjct: 68 FMVMPIMIGGFGNWLVPLMIGAPDM 92
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/56 (66%), Positives = 40/56 (71%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF
Sbjct: 180 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLF 235
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHL
Sbjct: 93 AFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHL 152
Query: 435 AGIS 446
AG+S
Sbjct: 153 AGVS 156
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Query: 435 AGIS 446
+GIS
Sbjct: 153 SGIS 156
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N LVP+++GAPDM
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 73.7 bits (173), Expect = 4e-12
Identities = 39/68 (57%), Positives = 44/68 (64%)
Frame = +3
Query: 243 STRYAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 422
+T +FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 423 SLHLAGIS 446
SLHL IS
Sbjct: 150 SLHLTSIS 157
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI Y H F
Sbjct: 181 KMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAF 236
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
YSTN KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLM 66
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N ++PL++GA DM
Sbjct: 67 IFFLAMPALIGGFGNYMLPLMIGATDM 93
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/68 (55%), Positives = 44/68 (64%)
Frame = +3
Query: 243 STRYAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 422
+T AFPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF
Sbjct: 90 ATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIF 149
Query: 423 SLHLAGIS 446
+LH+ IS
Sbjct: 150 ALHMTSIS 157
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY HLF
Sbjct: 181 KLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLF 236
Score = 41.5 bits (93), Expect = 0.019
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
YSTN KDI LY EL PG L G++Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILM 66
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPD 252
N ++PL++GA D
Sbjct: 67 IFFMVMPALIGGFGNYMLPLMIGATD 92
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+ H+F
Sbjct: 286 KVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIF 341
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H+
Sbjct: 199 AFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHV 258
Query: 435 AGIS 446
+G S
Sbjct: 259 SGAS 262
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/55 (58%), Positives = 38/55 (69%)
Frame = +2
Query: 518 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LY HLF
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLF 239
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/63 (50%), Positives = 35/63 (55%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
+FPR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL
Sbjct: 97 SFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHL 156
Query: 435 AGI 443
GI
Sbjct: 157 VGI 159
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
++TNHK IG LY EL PG L G+ YN I T H
Sbjct: 10 FTTNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLM 69
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N VP+++GAPDM
Sbjct: 70 LFVVVMPILFGGFGNYFVPILIGAPDM 96
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 67.7 bits (158), Expect = 2e-10
Identities = 40/84 (47%), Positives = 44/84 (52%)
Frame = +1
Query: 4 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 183
STNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 10 STNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFX 69
Query: 184 XXXXXXXXXXXN*LVPLILGAPDM 255
N LVPL++GAPDM
Sbjct: 70 MXMPIMIGGFGNWLVPLMIGAPDM 93
Score = 40.7 bits (91), Expect = 0.033
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 377
AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 94 AFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LY HLF
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLF 278
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIF 422
AFPR+NNI F V NGAGTG TVY PLS++ G +VD+AI
Sbjct: 133 AFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAIL 191
Query: 423 SLHLAGIS 446
SLH+AG S
Sbjct: 192 SLHIAGAS 199
Score = 39.1 bits (87), Expect = 0.099
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 16/100 (16%)
Frame = +1
Query: 4 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY- 141
STNHKDIGTLY AEL PG + D DQ Y
Sbjct: 33 STNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYH 92
Query: 142 --NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDM 255
N ++TAH N VP+++GAPDM
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDM 132
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +3
Query: 258 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 437
FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+
Sbjct: 95 FPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLS 154
Query: 438 GIS 446
GIS
Sbjct: 155 GIS 157
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILY HLF
Sbjct: 181 KLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLF 236
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 180
S+N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68
Query: 181 XXXXXXXXXXXXN*LVPLILGAPDM 255
N L+PL LG PDM
Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPDM 93
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 425
AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 9 AFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/51 (47%), Positives = 27/51 (52%)
Frame = +1
Query: 529 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFI 681
CM C +Y TCFS S+Y IIN K KY IF W P +STFI
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFI 147
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL
Sbjct: 120 AFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHL 179
Query: 435 AGIS 446
+GIS
Sbjct: 180 SGIS 183
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILY HLF
Sbjct: 207 KLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLF 262
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 180
S+N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94
Query: 181 XXXXXXXXXXXXN*LVPLILGAPDM 255
N L+P+++G PDM
Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPDM 119
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 435 AGIS 446
+G+S
Sbjct: 171 SGLS 174
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 435 AGIS 446
+G+S
Sbjct: 171 SGLS 174
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 435 AGIS 446
+G+S
Sbjct: 171 SGLS 174
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 435 AGIS 446
+G+S
Sbjct: 171 SGLS 174
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/68 (50%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIF 422
AFPR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF
Sbjct: 122 AFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIF 181
Query: 423 SLHLAGIS 446
+LHL+G+S
Sbjct: 182 ALHLSGVS 189
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 593 ITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
IT++LTDRN NTSFF+ AGGGDPIL+ HLF
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLF 261
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 180
STN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 37 STNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIF 96
Query: 181 XXXXXXXXXXXXN*LVPLILGAPDM 255
N L+PL++G PDM
Sbjct: 97 FMVMPALIGGFGNFLMPLMIGGPDM 121
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 62.5 bits (145), Expect = 9e-09
Identities = 33/64 (51%), Positives = 39/64 (60%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AF R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL
Sbjct: 99 AFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHL 158
Query: 435 AGIS 446
+G S
Sbjct: 159 SGFS 162
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+ +PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LY HLF
Sbjct: 185 ENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLF 241
Score = 46.8 bits (106), Expect = 5e-04
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
+STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 12 FSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILM 71
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N L+PL+LGA DM
Sbjct: 72 IFFFVMPALVGGFGNYLMPLMLGASDM 98
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXX 174
+STNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 10 FSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLM 69
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N VP+++G+PDM
Sbjct: 70 IFFMVMPAMIGGFGNWFVPILIGSPDM 96
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N LVP+++GAPDM
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDM 92
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/44 (45%), Positives = 21/44 (47%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 386
AFPR+NNI F VE GAGTG TV LS I
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +3
Query: 327 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 446
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG S
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGAS 51
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LY HLF
Sbjct: 189 DQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLF 245
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 177
+ NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 18 TVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMI 77
Query: 178 XXXXXXXXXXXXXN*LVPLILGAPDM 255
N ++PL+LGAP+M
Sbjct: 78 FFLVMPILIGGFGNWMLPLMLGAPEM 103
Score = 35.9 bits (79), Expect = 0.93
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+N + F + G G+ T YPPLS S+D I LH
Sbjct: 104 AFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHT 162
Query: 435 AGI 443
GI
Sbjct: 163 VGI 165
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = +1
Query: 97 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDM 255
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPDM
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDM 76
Score = 35.5 bits (78), Expect = 1.2
Identities = 24/64 (37%), Positives = 29/64 (45%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFPR+NN+ F + G + PL G SVDLAIF LHL
Sbjct: 77 AFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHL 134
Query: 435 AGIS 446
AG+S
Sbjct: 135 AGVS 138
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +2
Query: 524 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+ H+F
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIF 238
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +3
Query: 258 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 437
FPR+NN+ F + E G G G T+YP L H + D +F++HL
Sbjct: 97 FPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLL 156
Query: 438 GIS 446
GIS
Sbjct: 157 GIS 159
Score = 34.3 bits (75), Expect = 2.8
Identities = 23/86 (26%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXXX 177
S +HK IG Y EL G L GD Q YN ++T+H
Sbjct: 10 SVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMV 69
Query: 178 XXXXXXXXXXXXXN*LVPLILGAPDM 255
N +P++ G PDM
Sbjct: 70 FAFIMPVMMGGLVNYFIPVMAGFPDM 95
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 584 AGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
A IT+LL DRN T+FF+P+GGGDPIL+ HLF
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLF 325
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +3
Query: 339 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 446
G G G T+YPPLS G VD +FSLHLAG+S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVS 251
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/64 (45%), Positives = 34/64 (53%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
A PR+ N+ F + G G VYPP SS +AH +VDL IF LHL
Sbjct: 83 AXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHL 142
Query: 435 AGIS 446
AGIS
Sbjct: 143 AGIS 146
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
+ PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+
Sbjct: 95 SMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHM 154
Query: 435 AGIS 446
AG+S
Sbjct: 155 AGMS 158
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +2
Query: 584 AGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
A +T+LL DR+ +TSF+ P GGGDPIL+ HLF
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLF 238
Score = 38.7 bits (86), Expect = 0.13
Identities = 22/84 (26%), Positives = 33/84 (39%)
Frame = +1
Query: 4 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 183
S NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 11 SVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFF 70
Query: 184 XXXXXXXXXXXN*LVPLILGAPDM 255
N +PL++ D+
Sbjct: 71 FVMPTSIGGLGNWFIPLMIKIKDL 94
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+ HLF
Sbjct: 195 DRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLF 251
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/81 (38%), Positives = 39/81 (48%)
Frame = +3
Query: 204 WRIWKLISSSYTRSTRYAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 383
W IWKLI+S+ Y FP + N + PL+S+
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINK---RNSS--------PLASS 76
Query: 384 IAHRGRSVDLAIFSLHLAGIS 446
IAH G SVD+AIFSLHLAG+S
Sbjct: 77 IAHAGASVDMAIFSLHLAGVS 97
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 616
D++PLF+ AV IT AGAIT+LLTDR
Sbjct: 120 DRVPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +2
Query: 518 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
L LF ++ + + A IT++LTD++L T F+D GGDP+LY HLF
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLF 219
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 342 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 446
A G T YPPLSS SV+ ++FSLHLAGI+
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIA 142
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +2
Query: 584 AGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
AGA+T+L D+ L T+FF+PA GGDP++Y ++F
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIF 191
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 518 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+PLF A+ T+ A A+ +L D TSFF+P GGGDP++Y HLF
Sbjct: 192 MPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLF 246
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 532 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 636
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 46.8 bits (106), Expect = 5e-04
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
+STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 12 FSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILM 71
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N L+PL+LGA DM
Sbjct: 72 IFFFVMPALVGGFGNYLMPLMLGASDM 98
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2
Query: 587 GAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
G + +LL+D + NT FFDP GDPILY HLF
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLF 241
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 243 STRYAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAI 419
S A+PRIN+I E G GTG T+YPPLS+++ +VD+ I
Sbjct: 94 SPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVII 153
Query: 420 FSLHLAGIS 446
F L ++G++
Sbjct: 154 FGLLVSGVA 162
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++P+FV G +LL D + TSFF P GGGDP+L+ H F
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFF 261
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 584 AGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
A A+ +LLTDR + FF+PA GGDPI Y HLF
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLF 237
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHL 679
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+ ++
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYM 67
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 43.2 bits (97), Expect = 0.006
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 174
YSTN KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLM 66
Query: 175 XXXXXXXXXXXXXXN*LVPLILGAPDM 255
N L+PL++GA DM
Sbjct: 67 IFFLVMPALIGGFGNYLLPLMIGASDM 93
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 41.9 bits (94), Expect = 0.014
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYXHLF 682
++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+ HLF
Sbjct: 206 KMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLF 261
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.033
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +3
Query: 258 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 437
+PR+N +E G+GTG T+YPPLS+++++ G +D IF L A
Sbjct: 102 YPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAA 159
Query: 438 GIS 446
GI+
Sbjct: 160 GIA 162
Score = 40.7 bits (91), Expect = 0.033
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 536 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++ +T+F ++ DR+ NT FF+ + GDP+LY HLF
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLF 241
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 40.3 bits (90), Expect = 0.043
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++PLFV + + A A+ +LL DR L ++FFDP GG +L+ H F
Sbjct: 199 RVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYF 254
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 39.9 bits (89), Expect = 0.057
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYXHL 679
+LPL + + +TA A +LL DR+ T FF GGGDPIL+ HL
Sbjct: 213 RLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHL 272
Query: 680 F 682
F
Sbjct: 273 F 273
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 431
AFPR+N F G AG G T Y PLS+N+ G L + ++
Sbjct: 125 AFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIF 184
Query: 432 LAGIS 446
+ G+S
Sbjct: 185 VTGVS 189
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 39.9 bits (89), Expect = 0.057
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
D+LP+ V + + A +L DRN T FFD A GG P+L+ HLF
Sbjct: 215 DRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLF 271
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 39.9 bits (89), Expect = 0.057
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2
Query: 617 NLNTSFFDPAGGGDPILYXHLF 682
N T+FFDPAGGGD IL+ HLF
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLF 212
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 39.9 bits (89), Expect = 0.057
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +1
Query: 4 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 183
+ +HKDIG LY EL +PG + + YN+++T+H
Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLF 149
Query: 184 XXXXXXXXXXXN*LVPLILGAPDM 255
N L+PL++GA DM
Sbjct: 150 LFATPIIAAFSNYLIPLLIGADDM 173
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 590 AITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
AI +LL DRN TSFF AG G IL+ HLF
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLF 320
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 39.5 bits (88), Expect = 0.075
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+++PLFV + AF A LL DR+ T FF P GGD +L+ HLF
Sbjct: 197 NRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLF 253
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.099
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +2
Query: 260 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 430
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLFV ++ T+ ++ ++ + FDPA GGDP+L+ H F
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFF 254
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 590 AITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
AIT LL DRN+N++ +D GDP+LY HLF
Sbjct: 217 AITGLLLDRNINSTIYDVI--GDPVLYQHLF 245
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 243 STRYAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLA 416
++ + PR+N I F ++ +G T+YPPLS+ A G ++DL+
Sbjct: 99 TSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLS 158
Query: 417 IFSLHLAGIS 446
+ +H+ GIS
Sbjct: 159 LLVVHVLGIS 168
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2
Query: 590 AITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
A+ +LL DRN T+FF A GGDPI + HLF
Sbjct: 260 ALIMLLLDRNFGTTFFTVA-GGDPIFWQHLF 289
Score = 32.7 bits (71), Expect = 8.6
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 428
AFPRIN I F ++ A T T+Y PLS ++ +VD+ + L
Sbjct: 148 AFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGL 205
Query: 429 HLAGIS 446
HL G+S
Sbjct: 206 HLTGVS 211
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 37.9 bits (84), Expect = 0.23
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++L +FV A + AF G A+T+L D+ + T FFD A GGD + Y +LF
Sbjct: 179 NKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLF 235
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 37.5 bits (83), Expect = 0.30
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++P++V +V + A ++L +R + S+F+PA GGDP+L+ F
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFF 245
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 37.1 bits (82), Expect = 0.40
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 590 AITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
A+ ++ DR+ T+FF+ A GGDPIL HLF
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLF 396
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 36.7 bits (81), Expect = 0.53
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 144
+STNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 10 FSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2;
Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I
- Yarrowia lipolytica (Candida lipolytica)
Length = 399
Score = 36.3 bits (80), Expect = 0.70
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 165
+STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 12 FSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 35.9 bits (79), Expect = 0.93
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+++P+FV AV + +F A +L DR FF A GDPIL+ HLF
Sbjct: 202 NRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLF 257
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 35.9 bits (79), Expect = 0.93
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 165
YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 7 YSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 611 DRNLNTSFFDPAGGGDPILYXHLF 682
+R + FFDP GGDP+L+ HLF
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLF 277
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDP 661
+LPL + A+ ITA A ++L DR + T FF P AGGG P
Sbjct: 218 RLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQP 277
Query: 662 ILYXHLF 682
+L+ HLF
Sbjct: 278 LLWQHLF 284
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
+LPLF + + + +++ DR T+FF+P GG+ +++ HLF
Sbjct: 189 RLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLF 244
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 512 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 628
D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 163 DKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 2.8
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 9 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 92
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLH 431
AFPR+N + + E+GA G T+Y PL++ I G +DLA ++
Sbjct: 101 AFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIF 160
Query: 432 LAGIS 446
L +S
Sbjct: 161 LFSLS 165
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYXHLF 682
++P+F ++ T +LL DRNL T FF +PAGG +L+ HLF
Sbjct: 189 KMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLF 243
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 33.9 bits (74), Expect = 3.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++P+FV +T+ A+ +L+ DR +FF+ GG + Y HLF
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLF 255
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 1 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 144
+STNHKDIGT Y EL PG+ I G+ Q+YN
Sbjct: 10 FSTNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +2
Query: 584 AGAITILLTDRNLNTSFF-----DPAGGGDPILYXHLF 682
AGAI +LL +R+L FF DPA GDP L+ H+F
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIF 245
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++PLFV TA + +R T FFD A GG P+L+ LF
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLF 233
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 33.5 bits (73), Expect = 4.9
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPI 664
+LPL + A ITA A +L+ DR+L TSFF AG GG P+
Sbjct: 232 RLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPV 291
Query: 665 LYXHLF 682
L+ HLF
Sbjct: 292 LFQHLF 297
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++P+ + + TAF +L +R L FFD GGDP+L+ HLF
Sbjct: 222 KMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLF 277
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +3
Query: 255 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 434
AFP +NN+ F ++ G T Y PL+SN G + + L +
Sbjct: 133 AFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQI 192
Query: 435 AGI 443
AGI
Sbjct: 193 AGI 195
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 515 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYXHLF 682
++P+F A+ I A A +L +R+ FF GGDP+L+ HLF
Sbjct: 206 RMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLF 261
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 669 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 532
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,474,543
Number of Sequences: 1657284
Number of extensions: 9052951
Number of successful extensions: 19350
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 18354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19258
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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