Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120695.seq
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 306 STNGRLDGLIVLTSLTYW 253
           +TNG LD LIV  S  Y+
Sbjct: 333 TTNGDLDELIVTLSAHYF 350


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 306 STNGRLDGLIVLTSLTYW 253
           +TNG LD LIV  S  Y+
Sbjct: 259 TTNGDLDELIVTLSTHYF 276


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 10/30 (33%)
 Frame = -3

Query: 348 HLPYFAAS----------CTSGPDSTNGRL 289
           HLPYFAA+            S PD  NG+L
Sbjct: 285 HLPYFAAAVAAASNLSPKTNSSPDLWNGKL 314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,118
Number of Sequences: 336
Number of extensions: 2376
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)