Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120693.seq
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003582-1|AAO39586.1|  760|Drosophila melanogaster LD18312p pro...    33   0.38 
AF132164-1|AAD34752.1|  969|Drosophila melanogaster unknown prot...    33   0.38 
AE014296-3650|AAG22184.1|  767|Drosophila melanogaster CG7139-PB...    33   0.38 
AE014296-3649|AAF51804.1|  969|Drosophila melanogaster CG7139-PA...    33   0.38 

>BT003582-1|AAO39586.1|  760|Drosophila melanogaster LD18312p
           protein.
          Length = 760

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 201 PTSC*AHLLQTIICATFTSSPITITLEITFSSRQTSFAISVPV*IA-VTFIVSQARTATN 377
           PT    HL +  +C TF   P    LE+ F++  +++  +V V  + V  ++S+A     
Sbjct: 481 PTDIATHLTKMKLCETFPDVPTDTVLEV-FAATGSNYVQTVEVLDSNVKSMLSKAELYDK 539

Query: 378 IRRAGKNSSSKRHVDEQRQPNKSQ 449
             R G+  S +  ++E+RQ  + +
Sbjct: 540 ALREGEKLSEQMALEERRQQQQQK 563


>AF132164-1|AAD34752.1|  969|Drosophila melanogaster unknown
           protein.
          Length = 969

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 201 PTSC*AHLLQTIICATFTSSPITITLEITFSSRQTSFAISVPV*IA-VTFIVSQARTATN 377
           PT    HL +  +C TF   P    LE+ F++  +++  +V V  + V  ++S+A     
Sbjct: 690 PTDIATHLTKMKLCETFPDVPTDTVLEV-FAATGSNYVQTVEVLDSNVKSMLSKAELYDK 748

Query: 378 IRRAGKNSSSKRHVDEQRQPNKSQ 449
             R G+  S +  ++E+RQ  + +
Sbjct: 749 ALREGEKLSEQMALEERRQQQQQK 772


>AE014296-3650|AAG22184.1|  767|Drosophila melanogaster CG7139-PB,
           isoform B protein.
          Length = 767

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 201 PTSC*AHLLQTIICATFTSSPITITLEITFSSRQTSFAISVPV*IA-VTFIVSQARTATN 377
           PT    HL +  +C TF   P    LE+ F++  +++  +V V  + V  ++S+A     
Sbjct: 488 PTDIATHLTKMKLCETFPDVPTDTVLEV-FAATGSNYVQTVEVLDSNVKSMLSKAELYDK 546

Query: 378 IRRAGKNSSSKRHVDEQRQPNKSQ 449
             R G+  S +  ++E+RQ  + +
Sbjct: 547 ALREGEKLSEQMALEERRQQQQQK 570


>AE014296-3649|AAF51804.1|  969|Drosophila melanogaster CG7139-PA,
           isoform A protein.
          Length = 969

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +3

Query: 201 PTSC*AHLLQTIICATFTSSPITITLEITFSSRQTSFAISVPV*IA-VTFIVSQARTATN 377
           PT    HL +  +C TF   P    LE+ F++  +++  +V V  + V  ++S+A     
Sbjct: 690 PTDIATHLTKMKLCETFPDVPTDTVLEV-FAATGSNYVQTVEVLDSNVKSMLSKAELYDK 748

Query: 378 IRRAGKNSSSKRHVDEQRQPNKSQ 449
             R G+  S +  ++E+RQ  + +
Sbjct: 749 ALREGEKLSEQMALEERRQQQQQK 772


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,425,613
Number of Sequences: 53049
Number of extensions: 544538
Number of successful extensions: 1889
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1750
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)