Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120691.seq
(706 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34; Nuc... 331 8e-90
UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: G... 161 2e-38
UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 - A... 69 1e-10
UniRef50_Q6JKB3 Cluster: Glycoprotein 41; n=3; Nucleopolyhedrovi... 49 1e-04
UniRef50_Q9DVU6 Cluster: PxORF87 peptide; n=1; Plutella xylostel... 40 0.079
UniRef50_Q6LUA5 Cluster: Hypothetical fimbrial assembly protein ... 38 0.24
UniRef50_Q5CRL8 Cluster: Sin3 like paired amphipathic helix cont... 35 1.7
UniRef50_Q9ZQK4 Cluster: Mutator-like transposase; n=1; Arabidop... 33 5.2
>UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34;
Nucleopolyhedrovirus|Rep: Structural glycoprotein gp41 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 409
Score = 331 bits (814), Expect = 8e-90
Identities = 170/235 (72%), Positives = 178/235 (75%)
Frame = +2
Query: 2 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAARVPAERFEYISGIVCAKFAAGVRA 181
DTNPI+VNVVKRFESEETMIRHLIRLQKELGQ NAA +
Sbjct: 127 DTNPISVNVVKRFESEETMIRHLIRLQKELGQSNAAESLSSDSNIFQPSFVLNSLPAYAQ 186
Query: 182 KILQXXXXXXXXXXXXXXXQTTQLAVQYMVAESVTCNIPIPLPFNQQLANNYMTLLLKHA 361
K + LAVQYMVAE+VTCNIPIPLPFNQQLANNYMTLLLKHA
Sbjct: 187 KFYNGGADMLGKDALAEAAKQLSLAVQYMVAEAVTCNIPIPLPFNQQLANNYMTLLLKHA 246
Query: 362 TLPPNIQSAVESRRFPHINMINDLINAVIDDLFAXXXXXXXXXVERKKQARIMSLKENVA 541
TLPPNIQSAVESRRFPHINMINDLINAVIDDLFA + K +AR+MSLKENVA
Sbjct: 247 TLPPNIQSAVESRRFPHINMINDLINAVIDDLFAGGGDYYHYVLNEKNRARVMSLKENVA 306
Query: 542 FLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKNACQ 706
FLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTK+ACQ
Sbjct: 307 FLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAANAVNSPAAHLTKSACQ 361
>UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: Gp41
- Ecotropis obliqua NPV
Length = 338
Score = 161 bits (391), Expect = 2e-38
Identities = 87/221 (39%), Positives = 132/221 (59%), Gaps = 2/221 (0%)
Frame = +2
Query: 2 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAARVPAERF--EYISGIVCAKFAAGV 175
D NP+N+NVVKRF+S+E ++++ L G + VP+ F E++ I+
Sbjct: 69 DANPLNINVVKRFDSDEALMKNYENLVLRAG---GSVVPSNIFKNEFMEHIL-----PSY 120
Query: 176 RAKILQXXXXXXXXXXXXXXXQTTQLAVQYMVAESVTCNIPIPLPFNQQLANNYMTLLLK 355
K + LA+QY +A+SVT ++PIPLP QQL NN++TLLLK
Sbjct: 121 AQKFYNKGNFEVSNNSKSEAAKQLGLAIQYQIAQSVTSSVPIPLPLTQQLVNNFITLLLK 180
Query: 356 HATLPPNIQSAVESRRFPHINMINDLINAVIDDLFAXXXXXXXXXVERKKQARIMSLKEN 535
A +P NIQ AV S+++ +N I LIN +I+D+FA + K +ARI+SLKEN
Sbjct: 181 KAQIPNNIQQAVSSKKYTQLNNIIMLINQIIEDVFASGGEYYYYVLNEKTRARIISLKEN 240
Query: 536 VAFLAPLSASANIFNYMAELATRAGKQPSMFQNATFLTSAA 658
+ +L LS + NIF ++AE+ATR GKQP +F++A +T+++
Sbjct: 241 LTYLGALSETTNIFEFIAEMATRRGKQPGLFRDAYSITNSS 281
Score = 50.8 bits (116), Expect = 3e-05
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +3
Query: 129 SNIFQASFVLNSLPAYAQKFYNGGADMLGKDALAEAAKQLSLPSSTWWRNR*RAT----F 296
SNIF+ F+ + LP+YAQKFYN G + ++ +EAAKQL L ++
Sbjct: 105 SNIFKNEFMEHILPSYAQKFYNKGNFEVSNNSKSEAAKQLGLAIQYQIAQSVTSSVPIPL 164
Query: 297 PFRYRSISSWPTIT*LCCSSTPLCRQTYRAQSSRVAFRXXXXXXXXXXP*LTICLHGGGD 476
P + ++++ T L + +A SS+ + + GG+
Sbjct: 165 PLTQQLVNNFIT---LLLKKAQIPNNIQQAVSSK-KYTQLNNIIMLINQIIEDVFASGGE 220
Query: 477 YYHYVLNEKNR 509
YY+YVLNEK R
Sbjct: 221 YYYYVLNEKTR 231
>UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 309
Score = 68.5 bits (160), Expect = 1e-10
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 4/204 (1%)
Frame = +2
Query: 11 PINVNVVKRFESEETMIRHLIRLQKELGQGNAARVPAERFEYISGIVCAKFAAGVRAKIL 190
P+ V+V KRFE++E +I + L+K+ G A ++ GI F V + I+
Sbjct: 63 PLPVSVTKRFETDEELINYYKNLEKKYG--GATQLSGGTH----GIFDKSF---VISPIM 113
Query: 191 QXXXXXXXXXXXXXXXQTTQLAVQYMVAESVTCNIPIPLPFNQQLANNYMTLLLKHATLP 370
+ V+Y +A +VT + P+P+ N +A+ Y+ L + +
Sbjct: 114 KAYADKFYKRRLNVAASHLSDVVKYQMANAVTHSKPLPIVHND-VADEYLNTLKHRSPIA 172
Query: 371 PNIQSAVESRRFPHINMINDLINAVIDD-LFAXXXXXXXXXV-ERKKQARIMSLKENVAF 544
PN++ V R +N+ ND+ N +++D LF + + + ++ ++N+A+
Sbjct: 173 PNVEKLVADRSNQRLNVCNDVFNNLVEDVLFGSHNGYFINSILKNDLKGKVYKFRDNIAY 232
Query: 545 L--APLSASANIFNYMAELATRAG 610
L APL+ S N++ + + A AG
Sbjct: 233 LVNAPLTLSTNVYMLIEKAAINAG 256
>UniRef50_Q6JKB3 Cluster: Glycoprotein 41; n=3;
Nucleopolyhedrovirus|Rep: Glycoprotein 41 - Neodiprion
sertifer NPV
Length = 312
Score = 49.2 bits (112), Expect = 1e-04
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Frame = +2
Query: 269 VAESVTCNIPIPLPFNQQLANNYMTLLLKHATLPPNIQSAVESRRFPHINMINDLINAVI 448
+ ESVT N + + ++ L+ + +P ++ ++ P I++ D++N V+
Sbjct: 149 MTESVTRNRIMFYNIKDETFLEFLRLIRTKSDIPNSLLHSISIGNQPKISLFIDIVNDVV 208
Query: 449 DDLFAXXXXXXXXXVERKKQAR--IMSLKENVAFLAPLSAS--ANIFNYMAELATRAGKQ 616
F V K Q I + KENV + PL A IF + A+LAT AGK+
Sbjct: 209 TSAFTTDSYDNYYDVLLKPQLATLINNFKENVNYFVPLGAKHRMTIFEWAAQLATSAGKK 268
Query: 617 PSMF 628
S F
Sbjct: 269 RSPF 272
>UniRef50_Q9DVU6 Cluster: PxORF87 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF87 peptide - Plutella xylostella
granulovirus
Length = 283
Score = 39.5 bits (88), Expect = 0.079
Identities = 23/120 (19%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = +2
Query: 257 VQYMVAESVTCNIPIPLPFNQQLANNYMTLLLKHATLPPNIQSAVESRRFPHINMINDLI 436
+++ +++++T + PIP + ++Y+ LL LP NI +A+ ++ + +
Sbjct: 115 LKFQISDALTRSKPIP-SLASDVDSDYVKLLYHETQLPANISNAINDGSNENLKFVRGVF 173
Query: 437 NAVIDDLFA--XXXXXXXXXVERKKQARIMSLKENVAFL--APLSASANIFNYMAELATR 604
+ +++DL + + M ++N+ FL APL+ S ++++ + A +
Sbjct: 174 DKLVEDLLTGRYSGYYLKHCLSTGTLNKAMRFRDNITFLLDAPLTLSTDMYSLIERAAAK 233
>UniRef50_Q6LUA5 Cluster: Hypothetical fimbrial assembly protein
PilE; n=4; Vibrionaceae|Rep: Hypothetical fimbrial
assembly protein PilE - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 126
Score = 37.9 bits (84), Expect = 0.24
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 216 YPTYQRHRCKIFARTPAANLAQTMPEIYSNRSAGTRAALPCPNSFC 79
YP+YQ H K + +LA EI SNR+ GT P+ FC
Sbjct: 27 YPSYQSHILKSYRNQAMGDLAMIQLEIESNRTNGTAYPSSIPSDFC 72
>UniRef50_Q5CRL8 Cluster: Sin3 like paired amphipathic helix
containing protein; n=2; Cryptosporidium|Rep: Sin3 like
paired amphipathic helix containing protein -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 35.1 bits (77), Expect = 1.7
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +2
Query: 386 AVESRRFPHINMINDLINAVIDDLFAXXXXXXXXXVERKKQARIMSLKENVAFLAPLSAS 565
A+ES +N +D NA I L +E+ ++ + F+A L+AS
Sbjct: 1253 AMESSETIKLNQFSDKENAKISKLLLNNPVSFFVCMEQTFVKPLLYYSPKMKFIAKLAAS 1312
Query: 566 ANIFNYMAELATR-AGKQPSMFQNATFLTSAANAVNSP 676
A ++ + + R + PS+ + +T S N N P
Sbjct: 1313 AQWLGFLPDNSHRDIARSPSILRESTSTNSIRNNANEP 1350
>UniRef50_Q9ZQK4 Cluster: Mutator-like transposase; n=1; Arabidopsis
thaliana|Rep: Mutator-like transposase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 408
Score = 33.5 bits (73), Expect = 5.2
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 52 DHDTPPDSVAKRVGTRQRGPSPCRAIRIYFRHRLC*IRCRRTRKNFTTVALICWV-KTLW 228
D D+P S +KR T + S + + + R+ +TTV CWV + LW
Sbjct: 153 DEDSPKPSPSKRTQTMEMIGSAGSLTDLKLELSMLTLA---VRQQYTTVPYECWVDRCLW 209
Query: 229 PRRPNNSACRPVHGGGIGDVQHSHSVTVQSAAGQQ 333
R + P I D +H+ SVT +S +Q
Sbjct: 210 RVRASRQGNDPNFHVYIYDSEHTCSVTERSGRSRQ 244
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,247,208
Number of Sequences: 1657284
Number of extensions: 13546890
Number of successful extensions: 41458
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 39831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41447
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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