Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120689.seq
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 65 1e-09
UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera... 51 3e-05
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 39 0.099
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 35 1.6
UniRef50_Q93Y12 Cluster: Alpha glucosidase-like protein; n=5; Ma... 35 2.1
UniRef50_Q0UXN8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q7EY27 Cluster: Putative uncharacterized protein OSJNBa... 33 4.9
UniRef50_UPI0000F2D683 Cluster: PREDICTED: hypothetical protein;... 33 6.5
UniRef50_UPI0000F2D088 Cluster: PREDICTED: similar to retinoblas... 33 6.5
UniRef50_A3M9F0 Cluster: Putative signal peptide; n=1; Acinetoba... 33 6.5
UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles g... 33 6.5
UniRef50_Q6CGL2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 6.5
UniRef50_Q4TAJ4 Cluster: Chromosome undetermined SCAF7304, whole... 33 8.6
UniRef50_Q3M6L0 Cluster: Sensor protein; n=2; Nostocaceae|Rep: S... 33 8.6
UniRef50_Q2W909 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_Q0RSW8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A6QX21 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 8.6
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx
mori|Rep: Reverse transcriptase - Bombyx mori (Silk
moth)
Length = 1076
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 480 RPTEKGWARVRPM-LLDEAGKLYERVVVIRIALHSTNTGPDLAA*Q*NLRESDSNIDAIM 656
RP + A RP+ LLDEAGKL ER++ RI H GPDL+A Q RE S +DAI+
Sbjct: 519 RPVDTA-AGYRPIVLLDEAGKLLERILAARIVRHLVGVGPDLSAEQYGFREGRSTVDAIL 577
Query: 657 RLRVLSDE 680
R+R LSDE
Sbjct: 578 RVRSLSDE 585
Score = 39.5 bits (88), Expect = 0.075
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +2
Query: 359 GVRAR*SYVTLALGALGDGLVRLFEVCLESGRRPS 463
GV R + LALGALGD L+ L+ CLESGR PS
Sbjct: 472 GVHGR--VLALALGALGDRLLELYNGCLESGRFPS 504
>UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9;
Obtectomera|Rep: Reverse transcriptase - Papilio xuthus
Length = 1053
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 480 RPTEKGWARVRPM-LLDEAGKLYERVVVIRIALHSTNTGPDLAA*Q*NLRESDSNIDAIM 656
RP + A RP+ LLDE KL+ER++ R+ H T GPDL Q R S I IM
Sbjct: 498 RPADSP-AAYRPIILLDEVAKLFERIIANRLIKHMTTVGPDLDEKQFGFRAGRSTIHTIM 556
Query: 657 RLRVLSDE 680
R++ +++E
Sbjct: 557 RVKKITEE 564
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 39.1 bits (87), Expect = 0.099
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3
Query: 78 F*LFTCVDQLTAHLVLSGYWSP 143
F L VD+LTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 35.1 bits (77), Expect = 1.6
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 273 WYLPVRTHKRSYHQ 314
WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585
>UniRef50_Q93Y12 Cluster: Alpha glucosidase-like protein; n=5;
Magnoliophyta|Rep: Alpha glucosidase-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 991
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +2
Query: 107 HSPPGVKWLLEPIDIYNVNAPHTLRYSS-----KISVLSQRLPHPSNRNALLLHAEIGGA 271
H P G++WL IDI Y S + +V+ + L H +L+L ++GG
Sbjct: 783 HVPSGIQWLHSRIDINGYEEYSGTEYRSAGCTEEYNVIERDLEHAGEEESLILEGDVGGG 842
Query: 272 VVPTR 286
+V R
Sbjct: 843 LVLRR 847
>UniRef50_Q0UXN8 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 311
Score = 34.7 bits (76), Expect = 2.1
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +2
Query: 197 SVLSQRLP--HPSNRNALLLHAEIGGAVVPTRADSQEVLPPVICINVYIKTHISM*G 361
+ L+Q LP PS R+ALL A + GAVVP A +E++ V ++ ++ I M G
Sbjct: 255 TALNQILPTLFPSRRSALLAQAVLHGAVVPLGASVEELIRSVAYLDGWLHIAIVMMG 311
>UniRef50_Q7EY27 Cluster: Putative uncharacterized protein
OSJNBa0086N05.126; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0086N05.126 - Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 452 RRPSGRWADSSYRERMGAGSPHVAGRGGKII*ASRRHPNRPAL 580
R PS RW + R R G SP V G KI R N PA+
Sbjct: 50 RLPSARWGGARRRSRAGVDSPAVRAPGEKIAGVRARGWNSPAV 92
>UniRef50_UPI0000F2D683 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 285
Score = 33.1 bits (72), Expect = 6.5
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = -1
Query: 546 HIIFPPRPA----TWGEPAPILSL*DESAHLPLGRRPDSRQTSKSRTSPSPRAPRAKVTY 379
H+IF P P TW PAP +L H+P P +R R SP P P T+
Sbjct: 158 HLIFSPVPRLVPLTWNLPAPTPAL---FGHVPPLHAPLTRSPQAKRPSPEPPPPPPLTTH 214
Query: 378 DY 373
+
Sbjct: 215 PF 216
>UniRef50_UPI0000F2D088 Cluster: PREDICTED: similar to
retinoblastoma protein-binding zinc finger protein; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to
retinoblastoma protein-binding zinc finger protein -
Monodelphis domestica
Length = 1822
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1
Query: 531 PRPATWGEPAPILSL*DESAHLPLGRRPDSRQTSKSRTSPSPRAPRA 391
PR A WG + L + + L R P S + +S SP RAPRA
Sbjct: 59 PRRAAWGGVGALARLLWDLSPASLARAPSSLPSCRSPASPLARAPRA 105
>UniRef50_A3M9F0 Cluster: Putative signal peptide; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative signal
peptide - Acinetobacter baumannii (strain ATCC 17978 /
NCDC KC 755)
Length = 114
Score = 33.1 bits (72), Expect = 6.5
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 68 MYFFLIVYVCGPAHSPPGVKWLLEPIDIYNVNAPHTLRYSSKISVLSQ--RLPHPSNRNA 241
MY LI+ C P +PP PI ++ P+ L +S +S+ Q L PSN
Sbjct: 2 MYNLLILSACTPNTNPP-TPQANSPIQAVLLDQPNLLNNASNLSISQQMNALEDPSNAQV 60
Query: 242 LLLHAEIG-GAVVPTRAD 292
+L E AV TR +
Sbjct: 61 TILQTEPSEDAVSKTRTE 78
>UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1009
Score = 33.1 bits (72), Expect = 6.5
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 483 PTEKGWARVRPM-LLDEAGKLYERVVVIRIALHSTNTGPDLAA*Q*NLRESDSNIDAIMR 659
P E G VRP+ LLD AGK ER++V R+ H L+ Q R S +DAI R
Sbjct: 468 PGEPG--SVRPICLLDGAGKGLERIIVQRLNAHIEEVN-GLSDDQFGFRSRRSTVDAIQR 524
Query: 660 L 662
+
Sbjct: 525 V 525
>UniRef50_Q6CGL2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 881
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 471 HLPLGRRPDSRQTSKS--RTSPSPRAPRAKVTYDYLALTPHI 352
H+ +GR P + + TSP+P PR+ V DY +++PH+
Sbjct: 256 HVSMGRSPGAGYMAHMDRSTSPNPVMPRSPVPADYRSVSPHL 297
>UniRef50_Q4TAJ4 Cluster: Chromosome undetermined SCAF7304, whole
genome shotgun sequence; n=3; Coelomata|Rep: Chromosome
undetermined SCAF7304, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1753
Score = 32.7 bits (71), Expect = 8.6
Identities = 24/69 (34%), Positives = 31/69 (44%)
Frame = +2
Query: 455 RPSGRWADSSYRERMGAGSPHVAGRGGKII*ASRRHPNRPALDQHRSRSSCVTVKPQRER 634
R +GRW D+ R+ A SP AG G A+RR P R +SS R +
Sbjct: 1551 REAGRWLDAVAGTRLTAASPLAAGSGENA--AARRPPTSARGSLLRQQSSMDQPSLPRLQ 1608
Query: 635 LQYRRNHAL 661
Q RR + L
Sbjct: 1609 SQSRRENRL 1617
>UniRef50_Q3M6L0 Cluster: Sensor protein; n=2; Nostocaceae|Rep:
Sensor protein - Anabaena variabilis (strain ATCC 29413
/ PCC 7937)
Length = 714
Score = 32.7 bits (71), Expect = 8.6
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +2
Query: 107 HSPPGVKWLLE--PIDIYNV------NAPHTLRYSSKISVLSQRLPHPSNRNALLLHAEI 262
H PP W ++ P I+ V NA + + +S+ ++ L N + L AE+
Sbjct: 440 HLPPENLWTIQADPTQIHQVLMNLCVNARDAMPGNGTLSIFAENLLVDKNFAKMNLDAEV 499
Query: 263 GGAVVPTRADSQEVLPPVICINVY 334
G VV T AD+ +PP+I ++
Sbjct: 500 GPYVVITIADTGFGIPPLILERIF 523
>UniRef50_Q2W909 Cluster: Putative uncharacterized protein; n=1;
Magnetospirillum magneticum AMB-1|Rep: Putative
uncharacterized protein - Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264)
Length = 302
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 202 IVTTAAPPFKPKRITASRRNRRGGGTYPCGLTRGPTTSN 318
+VT + PK SR RRGGG P G T G SN
Sbjct: 53 VVTPSKSGVPPKVRRTSRSARRGGGAMPDGYTHGARLSN 91
>UniRef50_Q0RSW8 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 382
Score = 32.7 bits (71), Expect = 8.6
Identities = 26/78 (33%), Positives = 35/78 (44%)
Frame = -1
Query: 516 WGEPAPILSL*DESAHLPLGRRPDSRQTSKSRTSPSPRAPRAKVTYDYLALTPHILICVL 337
W P P L D A LP+ R D R +PS RA R + ++ L++ IL C
Sbjct: 266 WSVPDPRLDPHDPRAWLPIRTRADGEDRLPQRRAPSHRAVRVR-SHLGLSIVATIL-CAP 323
Query: 336 IYTFIHITGGRTSCESAR 283
+ F + RTS AR
Sbjct: 324 VGAFGLVYSMRTSERLAR 341
>UniRef50_A6QX21 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 183
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 477 SAHLPLGRRPDSRQTSKSRTSPSPRAPRAKVTYDY 373
S+HL + P + Q+S S TSP+ R+P +V D+
Sbjct: 74 SSHLNMANAPPTHQSSTSHTSPAYRSPTYQVATDH 108
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,632,101
Number of Sequences: 1657284
Number of extensions: 18256503
Number of successful extensions: 50104
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 46868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49995
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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