Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120681.seq
         (691 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g47630.1 68415.m05942 esterase/lipase/thioesterase family pro...    29   2.9  
At3g05770.1 68416.m00648 expressed protein                             28   6.7  
At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein si...    27   8.9  

>At2g47630.1 68415.m05942 esterase/lipase/thioesterase family
           protein similar to monoglyceride lipase from [Homo
           sapiens] GI:14594904, [Mus musculus] GI:2632162;
           contains Interpro entry IPR000379
          Length = 351

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 77  FYTIIHNCFDSYTFYCEKKNYLD 145
           F  ++++C+D YT  C ++ Y+D
Sbjct: 87  FANVVNDCYDYYTSICAQEEYMD 109


>At3g05770.1 68416.m00648 expressed protein
          Length = 410

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 518 SRQNSQGGGTHPRGLTSGP 462
           SR+ SQGGG H R +  GP
Sbjct: 6   SREESQGGGNHNRFVDEGP 24


>At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein
           similar to alpha-glucosidase II from SP:Q9F234 [Bacillus
           thermoamyloliquefaciens]; contains Pfam profile: PF01055
           Glycosyl hydrolases family 31
          Length = 991

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 679 KIGERTHSPSGVKWLLEPIDIYNVNAQLNLRYK 581
           +I   TH PSG++WL   IDI          Y+
Sbjct: 777 RILSMTHVPSGIQWLHSRIDINGYEEYSGTEYR 809


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,717,053
Number of Sequences: 28952
Number of extensions: 271289
Number of successful extensions: 589
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)