Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120680.seq
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 32 0.38
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 31 0.67
SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6) 31 0.67
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 31 0.89
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_47330| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_53807| Best HMM Match : MCM (HMM E-Value=0) 30 1.5
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 2.7
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 3.6
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 29 3.6
SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07) 29 4.7
SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26) 29 4.7
SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07) 29 4.7
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_19175| Best HMM Match : 7tm_1 (HMM E-Value=4.2e-05) 29 4.7
SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_17477| Best HMM Match : PSI (HMM E-Value=1.7) 28 6.2
SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 28 6.2
SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 28 6.2
SB_24090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/70 (25%), Positives = 37/70 (52%)
Frame = +3
Query: 480 QKQRVAAPSNEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRX 659
++ + AA SNE ++ DL ++I S+ +KKL E+ E K+ V + ++ + +
Sbjct: 2520 KEAKTAAKSNEQDKKDLENEIISLKGRIKKLEIALEEERRLKENLKSQVNDYRKRGDDQS 2579
Query: 660 NELDAKLNML 689
+ ++N L
Sbjct: 2580 KDFGTRMNEL 2589
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 283 VIDFCKGLEIAHDDILDCNWDSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILM 462
V+ FC G +H D L C W S + Y+ + F +K+K D L +F T + ++
Sbjct: 702 VVKFCNGKSSSHVDPLQCFWLS-RDYYDGVVDFFLKKTKED--HLNVVFLTPRTRAMVIC 758
Query: 463 R 465
R
Sbjct: 759 R 759
>SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6)
Length = 288
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 254 ARICT*N-CACCIXMNPI*RCATIVGRLC 171
AR T N CACC+ MN RC T+ G C
Sbjct: 245 ARCVTMNGCACCVTMNGYPRCVTMNGCAC 273
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 31.1 bits (67), Expect = 0.89
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 295 CKGLEIAHDDILDCNWDSDQVYHLN 369
C+ L +A +LDC W + VYH N
Sbjct: 43 CELLNLAEQQLLDCTWSTPGVYHGN 67
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 304 LEIAHDDILDCNWDSDQVYHLN 369
L +A +LDC W + +VYH N
Sbjct: 40 LNLAEQQLLDCTWSTPEVYHGN 61
>SB_47330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +3
Query: 492 VAAPSNEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRXNELD 671
+ PS +G D+LR ++S+ HV +T + +V+ ET N+ + EL NE +
Sbjct: 94 IGIPSWQGRTDELRRTLKSLFSHVTPEDTKNLLVVVSVET-----TNKQKIIELLTNEFN 148
Query: 672 AKL 680
++L
Sbjct: 149 SQL 151
>SB_53807| Best HMM Match : MCM (HMM E-Value=0)
Length = 789
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/57 (28%), Positives = 36/57 (63%)
Frame = +3
Query: 477 QQKQRVAAPSNEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQF 647
+ ++R+A + EGE D + IES+ ++++ + +S + V+ + + ++ NRF+QF
Sbjct: 69 RHRRRIAERAAEGEYLDEDEMIESI-ENLEDMKGHSVREWVSMQAPRLEIKNRFKQF 124
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 507 NEGERDDLRDKIESVLKHVKKLNTNSEK 590
NEG +D L+D +ES L+ KKLN N +K
Sbjct: 1193 NEGLQDRLKD-LESQLEEQKKLNANYQK 1219
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 390 EIQTRSQLVGRIVRDQAGVVENFDAVKF*QQKQRVAAPSNEGERDDLRDKIESVLKHVKK 569
E+ + +++ R+ R A + E+FD K R+ + EGE L++KI + +
Sbjct: 605 ELAEKQEVIDRLRRQLADMNEDFDENKTELADVRLNLEAREGEVKKLQNKINLHEAEIDR 664
Query: 570 LNTNSE 587
LN E
Sbjct: 665 LNELEE 670
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 420 RIVRDQAGVVENFDAVKF*QQKQRVAAPSNEGERDDLRDKIESVLKHVKKLNTNS 584
+IVRD+ GV + + + F + Q VA + + D +DK+ S+ + V++ ++ S
Sbjct: 38 KIVRDKHGVSKGYAFITF--ESQEVADGLRDNKGLDFKDKVLSIGQAVRRKSSRS 90
>SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07)
Length = 122
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 304 LEIAHDDILDCNWDSDQVYHLN 369
L +A +LDC W + VYH N
Sbjct: 5 LNLAEQQLLDCTWSTPGVYHGN 26
>SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26)
Length = 522
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 495 AAPSNEGERDDLRDKIESVLKHVKKLNTNSEKFM 596
AA +++ E D DK+ESVL +V + NT K M
Sbjct: 156 AAKTSQTELTDKYDKLESVLSYVLEENTRLSKDM 189
>SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07)
Length = 122
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 304 LEIAHDDILDCNWDSDQVYHLN 369
L +A +LDC W + VYH N
Sbjct: 5 LNLAEQQLLDCTWSTPGVYHGN 26
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 304 LEIAHDDILDCNWDSDQVYHLN 369
L +A +LDC W + VYH N
Sbjct: 189 LNLAEQQLLDCTWSTPGVYHGN 210
>SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 304 LEIAHDDILDCNWDSDQVYHLN 369
L +A +LDC W + VYH N
Sbjct: 65 LNLAEQQLLDCTWSTPGVYHGN 86
>SB_19175| Best HMM Match : 7tm_1 (HMM E-Value=4.2e-05)
Length = 431
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 340 WDSDQVYH--LNEIIFHKQKSKRDLNSLGALFATK---QGLLKILMRLNFDNKSNA 492
W +D+ H L++I F + + +N + LF K +GLLKI R + D +SN+
Sbjct: 313 WTADKGDHSILDKIAFCGRFANSFINPIVYLFQMKDFREGLLKICRRTDLDGRSNS 368
>SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 233 CACCIXMNPI*RCATIVG 180
CACC+ MN RC T+ G
Sbjct: 180 CACCVTMNGCSRCVTMNG 197
>SB_17477| Best HMM Match : PSI (HMM E-Value=1.7)
Length = 206
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 233 CACCIXMNPI*RCATIVG 180
CACC+ MN RC T+ G
Sbjct: 108 CACCVTMNGCSRCVTMNG 125
>SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 233 CACCIXMNPI*RCATIVG 180
CACC+ MN RC T+ G
Sbjct: 180 CACCVTMNGCARCVTMNG 197
>SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 233 CACCIXMNPI*RCATIVG 180
CACC+ MN RC T+ G
Sbjct: 180 CACCVTMNGCARCVTMNG 197
>SB_24090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 507 NEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRXNELDAKL 680
N+ ++ D+ + ES+ + +K L + K ++FK E + NE AKL
Sbjct: 150 NKRDKKDVDEINESLRREIKALKSELSKAKTERDSFKAKCEKNERLLESKLNECKAKL 207
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,291,985
Number of Sequences: 59808
Number of extensions: 342021
Number of successful extensions: 1144
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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