Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120680.seq
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126435-1|AAI26436.1| 248|Homo sapiens apolipoprotein L domain... 34 0.42
BC126433-1|AAI26434.1| 248|Homo sapiens apolipoprotein L domain... 34 0.42
BC042478-1|AAH42478.1| 302|Homo sapiens APOLD1 protein protein. 34 0.42
AK057867-1|BAB71601.1| 248|Homo sapiens protein ( Homo sapiens ... 34 0.42
U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open read... 31 3.0
U27109-1|AAC52065.1| 1228|Homo sapiens prepromultimerin protein. 30 9.0
U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein. 30 9.0
BC063848-1|AAH63848.1| 1228|Homo sapiens multimerin 1 protein. 30 9.0
AC093759-2|AAY40957.1| 1228|Homo sapiens unknown protein. 30 9.0
>BC126435-1|AAI26436.1| 248|Homo sapiens apolipoprotein L domain
containing 1 protein.
Length = 248
Score = 34.3 bits (75), Expect = 0.42
Identities = 28/100 (28%), Positives = 42/100 (42%)
Frame = +3
Query: 249 TCQRHERKILQCNRFLQRS*NCARRHT*LQLGQRSSLPFKRNYFSQAEIQTRSQLVGRIV 428
TCQ R+IL C F R C R LQ G+ +S+ + + +R L+ R
Sbjct: 126 TCQDQMREILSCLEFFCRWQGCGDRQL-LQCGRNASIALYNSVYFIVFFGSRGFLIPRRA 184
Query: 429 RDQAGVVENFDAVKF*QQKQRVAAPSNEGERDDLRDKIES 548
V + K QK + S G D+L +++ES
Sbjct: 185 EGDTKVSQAVLKAKI--QKLAESLESCTGALDELSEQLES 222
>BC126433-1|AAI26434.1| 248|Homo sapiens apolipoprotein L domain
containing 1 protein.
Length = 248
Score = 34.3 bits (75), Expect = 0.42
Identities = 28/100 (28%), Positives = 42/100 (42%)
Frame = +3
Query: 249 TCQRHERKILQCNRFLQRS*NCARRHT*LQLGQRSSLPFKRNYFSQAEIQTRSQLVGRIV 428
TCQ R+IL C F R C R LQ G+ +S+ + + +R L+ R
Sbjct: 126 TCQDQMREILSCLEFFCRWQGCGDRQL-LQCGRNASIALYNSVYFIVFFGSRGFLIPRRA 184
Query: 429 RDQAGVVENFDAVKF*QQKQRVAAPSNEGERDDLRDKIES 548
V + K QK + S G D+L +++ES
Sbjct: 185 EGDTKVSQAVLKAKI--QKLAESLESCTGALDELSEQLES 222
>BC042478-1|AAH42478.1| 302|Homo sapiens APOLD1 protein protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.42
Identities = 28/100 (28%), Positives = 42/100 (42%)
Frame = +3
Query: 249 TCQRHERKILQCNRFLQRS*NCARRHT*LQLGQRSSLPFKRNYFSQAEIQTRSQLVGRIV 428
TCQ R+IL C F R C R LQ G+ +S+ + + +R L+ R
Sbjct: 180 TCQDQMREILSCLEFFCRWQGCGDRQL-LQCGRNASIALYNSVYFIVFFGSRGFLIPRRA 238
Query: 429 RDQAGVVENFDAVKF*QQKQRVAAPSNEGERDDLRDKIES 548
V + K QK + S G D+L +++ES
Sbjct: 239 EGDTKVSQAVLKAKI--QKLAESLESCTGALDELSEQLES 276
>AK057867-1|BAB71601.1| 248|Homo sapiens protein ( Homo sapiens
cDNA FLJ25138 fis, clone CBR07057. ).
Length = 248
Score = 34.3 bits (75), Expect = 0.42
Identities = 28/100 (28%), Positives = 42/100 (42%)
Frame = +3
Query: 249 TCQRHERKILQCNRFLQRS*NCARRHT*LQLGQRSSLPFKRNYFSQAEIQTRSQLVGRIV 428
TCQ R+IL C F R C R LQ G+ +S+ + + +R L+ R
Sbjct: 126 TCQDQMREILSCLEFFCRWQGCGDRQL-LQCGRNASIALYNSVYFIVFFGSRGFLIPRRA 184
Query: 429 RDQAGVVENFDAVKF*QQKQRVAAPSNEGERDDLRDKIES 548
V + K QK + S G D+L +++ES
Sbjct: 185 EGDTKVSQAVLKAKI--QKLAESLESCTGALDELSEQLES 222
>U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open reading
frame protein.
Length = 182
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 380 FTSRNPNAISTRWAHCSRPSRGC 448
FT P A W CSRP+RGC
Sbjct: 60 FTPTQPRAPRPPWTPCSRPTRGC 82
>U27109-1|AAC52065.1| 1228|Homo sapiens prepromultimerin protein.
Length = 1228
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 528 LRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRXNE 665
+R KIE++ V LN ++ H +N+V R + E R NE
Sbjct: 674 IRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINE 719
>U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein.
Length = 1017
Score = 29.9 bits (64), Expect = 9.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 510 EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFE 650
+GE D L+DK+E++ + ++ N E ++ E K +V Q E
Sbjct: 49 DGENDSLKDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIE 95
>BC063848-1|AAH63848.1| 1228|Homo sapiens multimerin 1 protein.
Length = 1228
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 528 LRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRXNE 665
+R KIE++ V LN ++ H +N+V R + E R NE
Sbjct: 674 IRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINE 719
>AC093759-2|AAY40957.1| 1228|Homo sapiens unknown protein.
Length = 1228
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 528 LRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRXNE 665
+R KIE++ V LN ++ H +N+V R + E R NE
Sbjct: 674 IRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINE 719
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,880,486
Number of Sequences: 237096
Number of extensions: 1460372
Number of successful extensions: 3685
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3685
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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