Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120677.seq
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2116|AAF49941.2|  383|Drosophila melanogaster CG5626-PA...    44   2e-04

>AE014296-2116|AAF49941.2|  383|Drosophila melanogaster CG5626-PA
           protein.
          Length = 383

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 20/56 (35%), Positives = 37/56 (66%)
 Frame = +3

Query: 513 IRQTGGYWQFYGHHQGKKLYLKPEEALFLMESNCLRLNNNGXTMSLQEAYSILLNE 680
           +++  G ++ +G+ +  KLYL+  EA+FL+E   L+L   G  +S+++AY +LL E
Sbjct: 91  VKRKDGKFENFGYSEQGKLYLEYYEAMFLLEVGRLQLEYCGLVVSIEQAYVLLLGE 146



 Score = 37.1 bits (82), Expect = 0.022
 Identities = 25/78 (32%), Positives = 39/78 (50%)
 Frame = +1

Query: 277 PDPKLLSGEELVAKGVTRTEGALPIIGLKEVVPNGSWLEQKQIQVALEARKHLIEVNRIE 456
           P    LS +EL+A     TE   P  GLK     G+  E ++++ A E  +  + V RIE
Sbjct: 15  PKNSYLSAQELIAH--RHTEFEPPSGGLKRTKNEGTAAEVEELKRAQEYLRAQLSVPRIE 72

Query: 457 KQGSLSHAEWRNDLRLAE 510
           + G  + A W  + ++AE
Sbjct: 73  RLGGRALAIWNEEQQVAE 90


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,575,474
Number of Sequences: 53049
Number of extensions: 539795
Number of successful extensions: 996
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)