Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120676.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    57   2e-10
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    51   8e-09
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    36   2e-04
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    36   3e-04
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.2  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   7.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.5  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 56.8 bits (131), Expect = 2e-10
 Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
 Frame = +1

Query: 457 ISESVFAKFKGLRMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKFDGKE--IEM 630
           +SE++     G + +   +TL+PAF+SS++KNM  LI +C++  V+F   F G+E  +E+
Sbjct: 72  LSEAL-TNLPGEKWKEMRATLSPAFTSSKIKNMYSLISECAENFVDF---FQGREQDVEI 127

Query: 631 KQTMGHFTLEVIGACAFGI 687
           K+    F+ +VI   AFGI
Sbjct: 128 KEVFSRFSNDVIATAAFGI 146



 Score = 48.8 bits (111), Expect = 4e-08
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +2

Query: 299 DIYQYFKGHPYGGTFDGRRPVLHILDPELIKAIMIRDFDHFTDR-NTLNSMEPRYLSRSL 475
           DIY+ F    Y G +    P L + D ELIK I +++FD F D  +  N+     LS +L
Sbjct: 17  DIYRQFPTDRYVGYYHFMTPTLLLRDVELIKQIGVKEFDSFHDHVSVSNTNTEPLLSEAL 76

Query: 476 LNLKGLEWKGVAA 514
            NL G +WK + A
Sbjct: 77  TNLPGEKWKEMRA 89



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -3

Query: 343 KGTAVWMTFEILVDIQLVLVKRLCGFQTRSRFPRKITGFLNG 218
           +    +  F+IL      LV ++  F      PRK+T F  G
Sbjct: 163 RSLTTFSAFQILKIFLAHLVPKIAEFFEYRVLPRKVTDFFEG 204


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 51.2 bits (117), Expect = 8e-09
 Identities = 22/57 (38%), Positives = 38/57 (66%)
 Frame = +1

Query: 517 LTPAFSSSRLKNMIPLIQQCSKQMVEFLKKFDGKEIEMKQTMGHFTLEVIGACAFGI 687
           L+P F+S ++K M PL+Q+C   +  FL+    +EI++K  M  +++++I  CAFGI
Sbjct: 130 LSPVFTSGKMKLMFPLMQECVDDLRRFLEDHT-EEIDVKTAMKKYSVDIISTCAFGI 185



 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = +2

Query: 302 IYQYFKGHPYGGTFDGRRPVLHILDPELIKAIMIRDFDHFTDRN--TLNSMEP 454
           IY  F   PY G +   +PVL I  PE+++ ++++DFD FT+RN  T  S +P
Sbjct: 58  IYNQFST-PYVGIYIFHQPVLLIRSPEILRKVLVKDFDKFTNRNIATNESADP 109


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 487 GLRMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKFDGKE-IEMKQTMGHFTLEV 663
           GL+ + R   LTPAF  S L+  + +  + + ++VE LK+   K  I +   +  FTL+ 
Sbjct: 127 GLKWQTRRKILTPAFHFSILQQFVAIFNEETDKLVEVLKEECYKPFINVNAHVAQFTLKT 186

Query: 664 IGACAFG 684
           I   A G
Sbjct: 187 IAETAMG 193


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 487 GLRMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKFDGKE-IEMKQTMGHFTLEV 663
           GL+ + R   LTPAF  S L+  + +  + + ++VE LK+   K  + +   +  FTL+ 
Sbjct: 127 GLKWQTRRKILTPAFHFSILQQFVAIFNEETDKLVEVLKEECYKPFVNVNAHVAQFTLKT 186

Query: 664 IGACAFG 684
           I   A G
Sbjct: 187 IAETAMG 193


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 288 NTNWISTNISKVIHTA 335
           NTNW+ T++++++  A
Sbjct: 807 NTNWVPTSLNRLLDMA 822


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 656 NVK*PIVCFISISFPSNFL--RNSTICLEHCCMSGIIFFKRDELKAGVNVLQ 507
           NVK P++C +  S P++ L        ++H   +  + F+R   K    +LQ
Sbjct: 258 NVKIPVLCKLIQSIPTHLLDSEKKNFIVDH-ISNQFVAFRRKIYKWNHGLLQ 308


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 608 NFLRNSTICLEHC 570
           +FLR  TI L HC
Sbjct: 87  SFLRERTITLTHC 99


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 498 GKALQHINTCLQFVT 542
           GK++  + TCL F+T
Sbjct: 248 GKSIVQLLTCLNFIT 262


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 498 GKALQHINTCLQFVT 542
           GK++  + TCL F+T
Sbjct: 248 GKSIVQLLTCLNFIT 262


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -1

Query: 591 DHLLRTLLYEWNHIF*A*RTEGRC*CAATPF 499
           D +  T L +WNH     R + R  C   PF
Sbjct: 208 DFVAITKLEQWNHSKVHIREDKRLTCPKCPF 238


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 222 TEHLFFQNNQMY 187
           TEH +  NN+MY
Sbjct: 35  TEHNYTHNNEMY 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,598
Number of Sequences: 336
Number of extensions: 2955
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)