Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120676.seq
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51175| Best HMM Match : p450 (HMM E-Value=0) 47 1e-05
SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_21442| Best HMM Match : p450 (HMM E-Value=0) 43 3e-04
SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43) 42 6e-04
SB_1738| Best HMM Match : p450 (HMM E-Value=0) 41 0.001
SB_51609| Best HMM Match : p450 (HMM E-Value=0) 40 0.002
SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05) 40 0.002
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_2334| Best HMM Match : p450 (HMM E-Value=0) 39 0.004
SB_15630| Best HMM Match : p450 (HMM E-Value=0) 38 0.006
SB_57332| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_32737| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_5471| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_57069| Best HMM Match : GETHR (HMM E-Value=1.7e-10) 33 0.16
SB_20482| Best HMM Match : p450 (HMM E-Value=4.6e-28) 33 0.22
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_35141| Best HMM Match : p450 (HMM E-Value=0) 30 2.0
SB_49900| Best HMM Match : GETHR (HMM E-Value=5e-18) 29 4.7
SB_37842| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.4) 29 4.7
SB_1809| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09) 28 8.1
>SB_51175| Best HMM Match : p450 (HMM E-Value=0)
Length = 408
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 LTPAFSSSRLKNMIPLIQQCSKQMVEFLKKF--DGKEIEMKQTMGHFTLEVIGACAFGI 687
+TP FS+ +LK ++PLI + + +VE L + DGK +++ +T FT+E I + AFGI
Sbjct: 47 VTPTFSAVKLKQVVPLISESCRILVEQLGQACKDGKSVDVCRTYVKFTMETIVSTAFGI 105
>SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 LTPAFSSSRLKNMIPLIQQCSKQMVEFLKKF--DGKEIEMKQTMGHFTLEVIGACAFGI 687
+TP FS+ ++K ++PLI + + +VE L + DGK +++ +T FT+E I + AFGI
Sbjct: 47 VTPTFSAVKIKQVVPLISESCRILVEQLGQACKDGKSVDVCRTYVKFTMETIVSTAFGI 105
>SB_21442| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 305 YQYFK--GHPYGGTFDGRRPVLHILDPELIKAIMIRDFDHFTDRNTLNSMEPRYLSRSLL 478
++YFK G Y GR P + +++PE+IK IM++DF F +R ++ P L +
Sbjct: 70 FEYFKKYGRVYKMYSSGRIPTICVMEPEMIKQIMVKDFMKFRNRGLPLTLPPP-LDSEMF 128
Query: 479 NLKGLEWKGV 508
K +WK V
Sbjct: 129 LAKYPKWKRV 138
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 460 SESVFAKFKGLRMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKFD--GKEIEMK 633
SE AK+ + R+ + PAFS S+LK + LI+ +++M L+ + G+ +EM
Sbjct: 125 SEMFLAKYPKWKRVRK--VIAPAFSGSKLKGTVGLIEGAAERMNAKLESYSQTGESVEMT 182
Query: 634 QTMGHFTLEVIGACAFGI 687
L+VI + AFG+
Sbjct: 183 DLFSLCILDVILSSAFGV 200
>SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43)
Length = 440
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 293 QLDIYQYFKGHPYGGTFDGRRPVLHILDPELIKAIMIRDFDHFTDRNTLNSMEPRYLSRS 472
Q Y+ G Y G++P + + DPE++K IM+++F F DR + +P
Sbjct: 73 QFQEYRKKYGRLYAMFLVGKKPCVVVADPEIVKHIMVKEFSSFRDRPSFVMEQPEPFDSM 132
Query: 473 LLNLKGLEW 499
+ + K +W
Sbjct: 133 MTSAKYEKW 141
Score = 35.5 bits (78), Expect = 0.041
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 463 ESVFAKFKGLRMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKF--DGKEIEMKQ 636
+S+ K + R +TL+PAFS+ ++K M+PLI ++ L K G+ +
Sbjct: 130 DSMMTSAKYEKWHRIRNTLSPAFSAHKMKLMVPLINSSCDVLINKLTKVAESGESFFTHK 189
Query: 637 TMGHFTLEVIGACAFGI 687
T++ I AFGI
Sbjct: 190 FHQGLTMDTILKTAFGI 206
>SB_1738| Best HMM Match : p450 (HMM E-Value=0)
Length = 484
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 484 KGLRMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKF--DGKEIEMKQTMGHFTL 657
+G +R +TLTP FS+++LK ++P+I + + + + F G+ + F L
Sbjct: 116 QGALWKRIRTTLTPTFSTAKLKQIVPIIDKATATLQSKMASFAATGESTDCVNLFSLFAL 175
Query: 658 EVIGACAFGI 687
+VI AFG+
Sbjct: 176 DVITISAFGV 185
>SB_51609| Best HMM Match : p450 (HMM E-Value=0)
Length = 526
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +2
Query: 299 DIYQYFKGHPYGGTFDGRRPVLHILDPELIKAIMIRDFDHFTDRNTLNSMEPRYLSRSLL 478
+ Y+ ++G +F G+ +L + D L+KAIM+++FD F DR + P L + L
Sbjct: 92 EFYKQYEGPAIRLSFMGKPSIL-VKDTALLKAIMVKNFDCFHDRLKADFSPP--LDKMLT 148
Query: 479 NLKGLEWKGV 508
L G EW+ +
Sbjct: 149 ILPGEEWRNL 158
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 LTPAFSSSRLKNMIPLIQQ-CSKQMVEFLKKFD-GKEIEMKQTMGHFTLEVIGACAFGI 687
L+P FS+ +LK M+PL+ + C M + + G+ I++ + TL++I +CAFG+
Sbjct: 162 LSPNFSAHKLKGMVPLMNKACDVYMKKIACAAETGETIDVMKINPALTLDIIISCAFGV 220
>SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05)
Length = 278
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 514 TLTPAFSSSRLKNMIPLIQQ-CSKQMVEFLKKFDGK-EIEMKQTMGHFTLEVIGACAFGI 687
TL+P FS+ +LK+M+PL+ + C M + + + + I++ + TL++I +CAFG+
Sbjct: 38 TLSPNFSAHKLKSMVPLMNKACDVYMEKITRAAETRATIDVMKINPALTLDIIISCAFGV 97
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 296 LDIYQYFKGHPYGGTFDGRRPVLHILDPELIKAIMIRDFDHFTDRNTLNSMEPRYLSRSL 475
LD Y G + F +P L + DP++++ I +++FD F DR + P L L
Sbjct: 79 LDKYYKLYGRVFTMAFARGKPALVVCDPKMLREIFVKNFDCFYDRPVPFEL-PEPLDSFL 137
Query: 476 LNLKGLEWKGV 508
++G WK +
Sbjct: 138 SIVRGERWKRI 148
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +1
Query: 463 ESVFAKFKGLRMERRCSTLTPAFSSSRLKNMIPLIQ-QCSKQMVEFLKKFD-GKEIEMKQ 636
+S + +G R +R +TL+P F++ +K+M+PLI C M + K + G+ ++ +
Sbjct: 134 DSFLSIVRGERWKRIRNTLSPTFTAHNMKSMVPLINVPCDTLMKKIEKAAETGETFDIVK 193
Query: 637 TMGHFTLEVIGACAFGI 687
T+E+I + FGI
Sbjct: 194 YQQAVTVEIILSIVFGI 210
>SB_2334| Best HMM Match : p450 (HMM E-Value=0)
Length = 498
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 511 STLTPAFSSSRLKNMIPLIQQ-CSKQMVEFLKKFD-GKEIEMKQTMGHFTLEVIGACAFG 684
STLTP F+S +L+ M P +++ C M + K D G+ +++ +LE+I + AFG
Sbjct: 140 STLTPTFTSGKLRQMTPKMRESCDTLMDKIGKVADTGESVDILGMFSPMSLEIILSTAFG 199
Query: 685 I 687
I
Sbjct: 200 I 200
>SB_15630| Best HMM Match : p450 (HMM E-Value=0)
Length = 965
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 287 QYQLDIYQYFK--GHPYGGTFDGRRPVLHILDPELIKAIMIRDFDHFTDRNT--LNSMEP 454
Q Q +Y+K G Y G++P + + DP+++K IM+++F F DR + L EP
Sbjct: 69 QMQNQFQEYYKKYGRLYAMFLVGKKPSVIVGDPDIVKNIMVKEFSSFQDRPSFDLEQQEP 128
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 466 SVFAKFKGLRMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKF--DGKEIEMKQT 639
S + K + R ++L+PAFS+ ++K M+PLI ++ L K G + +
Sbjct: 131 SFMTRAKYDKWHRIRTSLSPAFSAHKMKLMVPLINSSCDVLINKLTKIADSGTSFFVHKF 190
Query: 640 MGHFTLEVIGACAFGI 687
T++ I AFGI
Sbjct: 191 HQGLTMDTILKTAFGI 206
>SB_57332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = +1
Query: 502 RRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKFDGKEI-----EMKQTMGHFTLEVI 666
R+ +TPAFS RL+ ++P++++ + ++VE EI + + + H +L++I
Sbjct: 120 RQRRMVTPAFSPGRLELLMPVMKKETLKLVEIWNLKLNNEITYVKNNVYEDVKHLSLDII 179
Query: 667 GACAFGI 687
G AFGI
Sbjct: 180 GRVAFGI 186
>SB_32737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Frame = +1
Query: 502 RRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKFDGKEI-----EMKQTMGHFTLEVI 666
R+ +TPAFS RL+ ++P++++ + ++VE EI + + + H +L++I
Sbjct: 289 RQRRMVTPAFSPGRLELLMPVMKKETLKLVEIWNLKLNNEITYVKNNVYEDVKHLSLDII 348
Query: 667 GACAFGI 687
G AFGI
Sbjct: 349 GRVAFGI 355
>SB_5471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 553 MIPLIQQCSKQMVEFLKKF--DGKEIEMKQTMGHFTLEVIGACAFGI 687
++PLI + + +VE L + DGK +++ ++ G FT+E I AFGI
Sbjct: 184 VLPLINESCRILVEKLGEACKDGKSVDVLRSYGKFTMETIVTTAFGI 230
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 347 GRRPVLHILDPELIKAIMIRDFDHFTDRNTL 439
G R + + DPE+ K I++++FD F +R L
Sbjct: 155 GTRAAILVADPEMAKQILVKEFDKFVNRPVL 185
>SB_57069| Best HMM Match : GETHR (HMM E-Value=1.7e-10)
Length = 547
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 511 STLTPAFSSSRLKNMIPLIQQCSKQMVEFL 600
STLTP F+S ++K MIPL+ + +++ L
Sbjct: 140 STLTPTFTSGKMKTMIPLVSKSCDTLIQKL 169
>SB_20482| Best HMM Match : p450 (HMM E-Value=4.6e-28)
Length = 473
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 463 ESVFAKFKGLRMERRCSTLTPAFSSSRLKNMIPLI-QQCSKQMVEFLKKFD-GKEIEMKQ 636
+S+ +G R +T++P FS+ ++K M+PL+ C M + + + G+ M +
Sbjct: 170 DSMLTVARGKTWHRVRTTVSPIFSTHKMKMMLPLMNSSCDVMMTKLQQAAESGESFNMHK 229
Query: 637 TMGHFTLEVIGACAFGI 687
T++ I FGI
Sbjct: 230 LSQGLTMDSILKTVFGI 246
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 31.5 bits (68), Expect = 0.66
Identities = 26/82 (31%), Positives = 37/82 (45%)
Frame = +2
Query: 248 KS*PRLKAAKSFHQYQLDIYQYFKGHPYGGTFDGRRPVLHILDPELIKAIMIRDFDHFTD 427
+S PR K QY LD+Y K HP + R + I A IR F H TD
Sbjct: 552 RSRPRPKRGTRIPQYMLDLYNSHKAHPDWISTQFR------FGDKWIGANTIRAF-HHTD 604
Query: 428 RNTLNSMEPRYLSRSLLNLKGL 493
+ +++ E L+R + +L L
Sbjct: 605 NDGIDASENSNLTRIIFDLSTL 626
>SB_35141| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 436 FEQYGTTISESVFAKFKGL--RMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKK 606
F + T SE + F + +R STLTP F+S +L+ M P I++ +++ + K
Sbjct: 113 FLLFRDTRSEMLHGMFSATDDKWKRIRSTLTPTFTSGKLRQMNPKIRESCDTLMDKIGK 171
>SB_49900| Best HMM Match : GETHR (HMM E-Value=5e-18)
Length = 1044
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 267 KPQSRFTNTNWISTNISKVIHTAVPLMEDV 356
K +SRF ++W S N S ++ T+VPL+ V
Sbjct: 256 KEESRFRESDWDSLNGSFLLLTSVPLLAHV 285
>SB_37842| Best HMM Match : GCC2_GCC3 (HMM E-Value=0.4)
Length = 146
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 267 KPQSRFTNTNWISTNISKVIHTAVPLMEDV 356
K +SRF ++W S N S ++ T+VPL+ V
Sbjct: 116 KEESRFRESDWDSLNGSFLLLTSVPLLAHV 145
>SB_1809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 493 RMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKK 606
+ +R STLTP F+S +L+ M P +++ +++ + K
Sbjct: 33 KWKRIRSTLTPTFTSGKLRQMTPKMRESCDTLMDKIGK 70
>SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09)
Length = 307
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 484 KGLRMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKF--DGKEIEMKQTMGHFTL 657
+G R +T++P FS+ ++K ++PL+ M+ L++ G+ M + T+
Sbjct: 6 EGETWHRVRTTVSPIFSAHKMKMVLPLMNNSCDIMMSKLQQAAEKGEPFNMYRMGQSLTM 65
Query: 658 EVIGACAFGI 687
+ I FGI
Sbjct: 66 DFILRIVFGI 75
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,493,811
Number of Sequences: 59808
Number of extensions: 355852
Number of successful extensions: 689
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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