Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120676.seq
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    56   4e-10
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    36   3e-04
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   3.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 55.6 bits (128), Expect = 4e-10
 Identities = 31/76 (40%), Positives = 40/76 (52%)
 Frame = +2

Query: 275 KSFHQYQLDIYQYFKGHPYGGTFDGRRPVLHILDPELIKAIMIRDFDHFTDRNTLNSMEP 454
           KS   +  DIY+ +K  P  G +  R P L + DPELIK I+IRDF  F +R        
Sbjct: 54  KSTAHFVKDIYEKYKNEPMVGLYATRSPFLLLNDPELIKDILIRDFSKFANRGLGVFERT 113

Query: 455 RYLSRSLLNLKGLEWK 502
             LS  LLNL+   W+
Sbjct: 114 EPLSPHLLNLEVERWR 129



 Score = 52.0 bits (119), Expect = 5e-09
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
 Frame = +1

Query: 511 STLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKFDGKE--IEMKQTMGHFTLEVIGACAFG 684
           S L+P F+S +LK M  LI +CS  +  +L K   K   IE ++    FT +VIG+CAFG
Sbjct: 133 SRLSPIFTSGKLKEMFYLIIECSLNLETYLDKLIEKNEPIECRELTARFTTDVIGSCAFG 192

Query: 685 I 687
           I
Sbjct: 193 I 193


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 36.3 bits (80), Expect = 3e-04
 Identities = 17/67 (25%), Positives = 33/67 (49%)
 Frame = +1

Query: 487 GLRMERRCSTLTPAFSSSRLKNMIPLIQQCSKQMVEFLKKFDGKEIEMKQTMGHFTLEVI 666
           G +       + P F  + LK+ I L    ++ +VE ++K +GKE +    M   T++++
Sbjct: 131 GQKWRNHRKLIAPTFHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYMSELTVDIL 190

Query: 667 GACAFGI 687
              A G+
Sbjct: 191 LETAMGV 197


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 312 YW*ISNWYW*NDFAAFKRGQDFQE 241
           Y+ +S WYW +  +A+K  Q  Q+
Sbjct: 276 YYVMSLWYWIDRNSAYKIDQRIQK 299


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 445 TVQSVTVSKMIKIPDHY 395
           +++SVTV K+I   DH+
Sbjct: 449 SIESVTVDKLITYFDHF 465


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 445 TVQSVTVSKMIKIPDHY 395
           +++SVTV K+I   DH+
Sbjct: 449 SIESVTVDKLITYFDHF 465


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 445 TVQSVTVSKMIKIPDHY 395
           +++SVTV K+I   DH+
Sbjct: 75  SIESVTVDKLITYFDHF 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,027
Number of Sequences: 438
Number of extensions: 3322
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)