BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120672.seq (685 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5; Nucleopoly... 172 8e-42 UniRef50_O10278 Cluster: Putative early 40.3 kDa protein; n=8; N... 91 2e-17 UniRef50_A2EH30 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2 UniRef50_Q62J76 Cluster: ABC transporter, periplasmic substrate-... 33 8.6 UniRef50_Q6C768 Cluster: Similar to DEHA0A13277g Debaryomyces ha... 33 8.6 >UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5; Nucleopolyhedrovirus|Rep: Early 40.9 kDa protein - Autographa californica nuclear polyhedrosis virus (AcMNPV) Length = 353 Score = 172 bits (418), Expect = 8e-42 Identities = 84/130 (64%), Positives = 95/130 (73%) Frame = +3 Query: 255 DYKSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQ 434 D +SALKCIDFDYYG C+K MFCNLQTNLQKCVDQHYAELDVLTRQ+YMS+PLV+LKCYQ Sbjct: 67 DDRSALKCIDFDYYGFCAK-MFCNLQTNLQKCVDQHYAELDVLTRQVYMSDPLVVLKCYQ 125 Query: 435 NGAYRLNGQIDLHLNRHIKCIKTQ*TMSLIWLDLHYKLI*QAHTASTSIPTTALK*PQPR 614 NGAYRLNGQI+LHLNRHIKCIKTQ + ++ + +K Sbjct: 126 NGAYRLNGQINLHLNRHIKCIKTQYNDEFDLVRFALQIDITSADGVDEYTDNGVKITTAP 185 Query: 615 CXFNVFFVNV 644 FNVFFVNV Sbjct: 186 LSFNVFFVNV 195 Score = 143 bits (347), Expect = 3e-33 Identities = 67/68 (98%), Positives = 68/68 (100%) Frame = +1 Query: 52 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 231 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA Sbjct: 1 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 60 Query: 232 VTCHIDDE 255 VTCHIDD+ Sbjct: 61 VTCHIDDD 68 Score = 33.1 bits (72), Expect = 6.5 Identities = 14/18 (77%), Positives = 14/18 (77%) Frame = +1 Query: 631 FLSTWRIMKRPFNADRCI 684 F RIMKRPFNADRCI Sbjct: 191 FFVNVRIMKRPFNADRCI 208 >UniRef50_O10278 Cluster: Putative early 40.3 kDa protein; n=8; Nucleopolyhedrovirus|Rep: Putative early 40.3 kDa protein - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV) Length = 355 Score = 91.5 bits (217), Expect = 2e-17 Identities = 41/68 (60%), Positives = 51/68 (75%) Frame = +1 Query: 52 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 231 M+R+ +Q+ G LPYITT D+EDRLR++I AKA F K CFEAVV + GLFVL+GGAA Sbjct: 1 MDRVASQIYSGALPYITTMDMEDRLRNRIAAKAGAKFFKACFEAVVADKSGLFVLSGGAA 60 Query: 232 VTCHIDDE 255 CHI D+ Sbjct: 61 TACHIGDD 68 Score = 65.7 bits (153), Expect = 1e-09 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 1/131 (0%) Frame = +3 Query: 255 DYKSALKCIDFDYYGLCSKKM-FCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCY 431 D ++ LKC+DFDYY + + LQ LQ CV + L L + + M + L ++KC+ Sbjct: 67 DDRNVLKCLDFDYYNATQEWLQLARLQQRLQACVQDNLEILSRLAQSVRMQDDLFVVKCF 126 Query: 432 QNGAYRLNGQIDLHLNRHIKCIKTQ*TMSLIWLDLHYKLI*QAHTASTSIPTTALK*PQP 611 QNGA+ NG + L ++ ++T L ++ +A + + Sbjct: 127 QNGAFCFNGPVQARLVPCVETVRTSFNGEFDLLRFALQVELKALNGVDEYVDQKVIVDRG 186 Query: 612 RCXFNVFFVNV 644 FNVFFVN+ Sbjct: 187 AAVFNVFFVNI 197 >UniRef50_A2EH30 Cluster: Putative uncharacterized protein; n=1; Trichomonas vaginalis G3|Rep: Putative uncharacterized protein - Trichomonas vaginalis G3 Length = 977 Score = 35.5 bits (78), Expect = 1.2 Identities = 20/71 (28%), Positives = 34/71 (47%) Frame = +2 Query: 416 NAEMLSKRSL*TKRSNRFALKPPYKMHKNTVNDEFDLVRFALQIDITSAYGVDEYTDNCV 595 NAE+L L K+ NR+ P + K ++N+ +++R ID+ A G + + Sbjct: 834 NAELLLSAGLSPKKKNRWLRSPMFNAFKGSMNEPINILRSLTMIDLLIAKGGNVNETDSR 893 Query: 596 KITTAPLXFQR 628 T A F+R Sbjct: 894 NSTPAIALFER 904 >UniRef50_Q62J76 Cluster: ABC transporter, periplasmic substrate-binding protein; n=57; Burkholderiales|Rep: ABC transporter, periplasmic substrate-binding protein - Burkholderia mallei (Pseudomonas mallei) Length = 650 Score = 32.7 bits (71), Expect = 8.6 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 477 LSANRFDRLVYRLRFDNISALPTDLTCKFDALTRPIQRNVGRR 349 + N F+R+VY+L D ++ L ++D L I RN RR Sbjct: 289 IGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWARR 331 >UniRef50_Q6C768 Cluster: Similar to DEHA0A13277g Debaryomyces hansenii; n=1; Yarrowia lipolytica|Rep: Similar to DEHA0A13277g Debaryomyces hansenii - Yarrowia lipolytica (Candida lipolytica) Length = 152 Score = 32.7 bits (71), Expect = 8.6 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = -2 Query: 474 SANR-FDRLVYRLRFDNISALPTDLTCKFDALTRPIQRNVGRRI 346 + NR F R+ Y FD + LPT L C F P + V R+ Sbjct: 31 TGNRVFFRIRYSQEFDQLKTLPTPLLCNFYIRNDPFSKTVSERL 74 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 600,241,984 Number of Sequences: 1657284 Number of extensions: 10842987 Number of successful extensions: 27090 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 26298 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 27078 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 53305790091 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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