Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120672.seq
         (685 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26161| Best HMM Match : Herpes_LP (HMM E-Value=1.7)                 29   2.7  
SB_47324| Best HMM Match : Lipase_GDSL (HMM E-Value=0.019)             28   8.1  
SB_38709| Best HMM Match : Ank (HMM E-Value=3.6e-10)                   28   8.1  
SB_23525| Best HMM Match : Lipase_GDSL (HMM E-Value=0.4)               28   8.1  

>SB_26161| Best HMM Match : Herpes_LP (HMM E-Value=1.7)
          Length = 412

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +1

Query: 244 IDDETTKAH*NA*ILIITAFAQKKCFATCKLIYKNASTNITLNWTC*RVKFTC 402
           + DE  +   +A  L + AFA KKC  T  +  KNA  +    W C R    C
Sbjct: 350 VGDEELEDFDDAARLSLPAFA-KKCMDTAAVCRKNAGKDWNKRWACRRAFVKC 401


>SB_47324| Best HMM Match : Lipase_GDSL (HMM E-Value=0.019)
          Length = 233

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 449 TKRSNRFALKPPYKMHKNTVNDEFD 523
           T+RS R A  PPYK  K T+   +D
Sbjct: 187 TERSERRARAPPYKQQKRTMWGSYD 211


>SB_38709| Best HMM Match : Ank (HMM E-Value=3.6e-10)
          Length = 218

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -3

Query: 239 HVTAAPPVNTNKPPFSQTTASKQSLINANFALATILSRKRSSISFVVI*GRTPRFS*FNK 60
           H+  A P   NKP  S  T   ++    N     +L  + + ++F    GRTP    +NK
Sbjct: 142 HLLDADPRYVNKPSSSGQTPLHKAAGKGNIESVRLLLTRGADVNFADKQGRTPMLLAWNK 201


>SB_23525| Best HMM Match : Lipase_GDSL (HMM E-Value=0.4)
          Length = 187

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 449 TKRSNRFALKPPYKMHKNTVNDEFD 523
           T+RS R A  PPYK  K T+   +D
Sbjct: 141 TERSERRARPPPYKQQKRTMWGSYD 165


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,242,223
Number of Sequences: 59808
Number of extensions: 368468
Number of successful extensions: 901
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)