Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120672.seq
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   6.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   6.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   6.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   8.3  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 238 CHIDDETTKAH*NA*ILIITAFAQKKCFATC 330
           C I     +   NA +L ITAF  ++  A C
Sbjct: 127 CIIQSFAAETSANATVLTITAFTVERYIAIC 157


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 169 DCFEAVVCENGGLFVLTGGAAV 234
           DC +A+   N  L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 169 DCFEAVVCENGGLFVLTGGAAV 234
           DC +A+   N  L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 169 DCFEAVVCENGGLFVLTGGAAV 234
           DC +A+   N  L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 556 CYINL*CKSNQIKLIVYCVFMHFIW 482
           C     C  + +  IVYCV   +IW
Sbjct: 143 CNFKAYCLFSFLNTIVYCVPAGWIW 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,967
Number of Sequences: 438
Number of extensions: 2960
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)