Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120667.seq
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    27   0.19 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   4.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.2  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   9.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.6  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = -2

Query: 684 HFFAVLDAVNGAHHVHFNFFRRSVYFVHFEQSIKIFNAHSLHIKRNVSDFSGGVN 520
           HF A+LD V+G H+   N  + +     F+  + + +  S+ I +    +  G N
Sbjct: 206 HFLALLDIVHGVHNELCNLCQVANSIYGFQNFLFVLSTFSICITQFYYCYDSGFN 260


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 293 LWFQSRKTKIRRAALHSWTDGVRSLAVGR 207
           +WF +R+ ++R+    + T  VRS A  R
Sbjct: 266 VWFSNRRARLRKQITSAATPLVRSYAPER 294


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 494 CKTDESTCSR 465
           C TDE TC+R
Sbjct: 34  CNTDEETCTR 43


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 165 CLPIRANYSN*PVDKIRFSKICLRNNYNSVL 73
           C      Y N  VD+I  S+  L+N +N ++
Sbjct: 16  CEQYTTKYDNINVDEILASERLLKNYFNCIM 46


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 211 PTARLRTPSVQECRAALRILVFRLW 285
           PT +   PS+ +C A L ++V  LW
Sbjct: 34  PTNQKYYPSLAKCYACLLMVVKILW 58


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 428 CAFICRIRTKLANANMLI 481
           C  +C  R K  N N+L+
Sbjct: 163 CVIVCIFRGKYRNINLLL 180


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 144 YSN*PVDKIRFSKICLRNNYNSVLK 70
           Y N  VD+I  SK  L N  N +L+
Sbjct: 38  YDNVDVDRILHSKRLLLNYINCLLE 62


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +1

Query: 406 PLKMEPNVCIHL 441
           P  ++PN+C H+
Sbjct: 45  PKNIDPNICTHI 56


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 289 GSKVGKPKSAGL 254
           GSK GKP+SA L
Sbjct: 687 GSKPGKPRSAFL 698


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 597 RNGQNRRTFGRN*NVHDGHH 656
           +N  N  T  +N + H GHH
Sbjct: 310 QNNNNAATNNQNHHHHAGHH 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,349
Number of Sequences: 336
Number of extensions: 4199
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)