Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120667.seq
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0167 + 11401984-11402023,11402024-11402293,11402499-114026...    29   3.5  
12_02_0878 + 23952594-23952802,23954846-23955083,23955122-239552...    29   4.6  
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581...    29   4.6  
09_03_0111 - 12440818-12441129,12441242-12441585,12441663-124419...    28   6.1  
01_05_0719 + 24580765-24581090,24581285-24581401,24582739-245828...    28   6.1  
01_06_1533 + 38041499-38041681,38041853-38041985,38042816-380429...    28   8.1  

>10_06_0167 +
           11401984-11402023,11402024-11402293,11402499-11402632,
           11402737-11403663
          Length = 456

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 358 NNIFGNILQRHLQSDFPLKMEPNVCIHLPDKNKTSEREHV 477
           NNI G  + RHL +   +    N C  +PD N  SE+++V
Sbjct: 205 NNISG-AMPRHLSNFTSMSGSINGCGDIPDNNSPSEKDNV 243


>12_02_0878 +
           23952594-23952802,23954846-23955083,23955122-23955238,
           23955719-23955818,23956168-23956196,23956477-23956704
          Length = 306

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 367 FGNILQRHLQSDFPLKMEPNVCIHLPDK 450
           FG ++   L+++  LK+EP + + L DK
Sbjct: 260 FGQVVSEDLENEIKLKIEPELAVELYDK 287


>01_06_0575 - 30357556-30357582,30357698-30357944,30358039-30358161,
            30358275-30358301,30358475-30358633,30359764-30359948,
            30360225-30360293,30360432-30362354,30363018-30363339,
            30363506-30363543
          Length = 1039

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = -3

Query: 269  KIRRAALHSWTDGVRSLAVGRLQHHDIFIGLGIQLVFPFVQTIQISQS 126
            KI+  ALH     +  +     +H D  +G GI L++P   +++  +S
Sbjct: 870  KIQNKALHRSQQRIMGVLGALARHMDALVGPGIMLLYPLYASMRAIES 917


>09_03_0111 -
           12440818-12441129,12441242-12441585,12441663-12441989,
           12443444-12443602,12443687-12443784,12444745-12444821
          Length = 438

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 48  INVKRGNFSILNCSCFEGRFLKNEFC 125
           + + +      +CSC+ G ++KN FC
Sbjct: 72  MGICKNTIGSFDCSCYPGSYMKNGFC 97


>01_05_0719 +
           24580765-24581090,24581285-24581401,24582739-24582866,
           24582938-24583036,24583126-24583284,24584113-24584199,
           24584324-24584415,24584570-24584644,24585257-24585424
          Length = 416

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -1

Query: 385 FAKCCQIYCCVCECLRIXCSKXGQSCAFGTFYGSK 281
           FA+   I   +C C++  C     SC + +F G +
Sbjct: 130 FARLPSIVDNICSCIQACCDDGRMSCGYSSFRGRR 164


>01_06_1533 +
           38041499-38041681,38041853-38041985,38042816-38042954,
           38043331-38043367,38045606-38045897,38046384-38046502
          Length = 300

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -1

Query: 295 FYGSKVGKPKSA-GLPCTLGPMV-YVVLPLAGSNTTIFLSGSGYNL 164
           FYG+      +A G+     P   Y     +GS TT + SG GYNL
Sbjct: 177 FYGAAAAAAAAAAGMVTGSSPFYPYFQFGQSGSTTTNYASGQGYNL 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,993,487
Number of Sequences: 37544
Number of extensions: 439626
Number of successful extensions: 1130
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)