Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120667.seq
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    27   0.74 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   1.3  
Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.            25   3.0  
AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding pr...    24   5.2  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    24   5.2  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   5.2  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   6.9  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 26.6 bits (56), Expect = 0.74
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -2

Query: 600 FEQSIKIFNAHSLHIKRNVSD--FSGGV 523
           +E  +++FN HSL  +R VS   F GG+
Sbjct: 871 YETRLQLFNLHSLSFRRQVSQACFIGGL 898


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -1

Query: 376 CCQIYCCVCECLRIXCSKXGQSCAFGTFYGSKVGKPKSAGLPCTLGPMVYVVLPLAGSNT 197
           CC  Y C C   ++ C K   +C     + S V     AG    L   +    P+   +T
Sbjct: 746 CCDFYACDC---KMECPKQ-CTCYHDQSWSSNVVDCSRAGYDDRLPDQI----PM--DST 795

Query: 196 TIFLSGSGY-NLSSHS 152
            I+L G+ + +LSSH+
Sbjct: 796 QIYLDGNNFRSLSSHA 811


>Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.
          Length = 143

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -2

Query: 663 AVNGAHHVHFNFFR--RSVYFVHFEQSIKI 580
           AVNGAH+  FN      SV FVH  +   +
Sbjct: 108 AVNGAHYCDFNHRMPYASVRFVHIGEGANV 137


>AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding
           protein AgamOBP27 protein.
          Length = 119

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 51  NVKRGNFSILNCSCFEGRFLK 113
           +++ GNFS+ N  CF   F+K
Sbjct: 32  SLRAGNFSVRNSLCFGECFVK 52


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 18/69 (26%), Positives = 29/69 (42%)
 Frame = +3

Query: 240 PRVQGSPADFGFPTLEP*NVPKAQLWPXXEHXXRRHSQTQQYIWQHFAKTLAKRFSFENG 419
           P VQG    F  PTL   N+P+ +  P  +         +  +WQ   + L+   +    
Sbjct: 100 PLVQGGTISFLVPTLAILNLPQWKC-PPDDAINAMTDTDRTELWQVRMRELSGAIAVAAV 158

Query: 420 TKRVHSFAG 446
           T+ V  F+G
Sbjct: 159 TQLVLGFSG 167


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +2

Query: 449 RTKLANANMLIRRFYIINRDTTDQFTPPEKSETFLLICRE 568
           R K +     +RR YI+ R    +     K   FL +C E
Sbjct: 294 RAKSSEQREDLRRLYILARSNLKRKIKASKRRCFLALCDE 333


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 51  NVKRGNFSILNCSCFEGRFLKNEFCR 128
           N++RG+       C EG F +N + R
Sbjct: 79  NIRRGDHLACTKHCVEGCFCRNGYVR 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,912
Number of Sequences: 2352
Number of extensions: 19807
Number of successful extensions: 44
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)