Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120662.seq
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF471259-1|AAQ05434.1|  122|Homo sapiens Ig heavy chain variable...    31   5.1  
Y12042-1|CAA72773.1|   90|Homo sapiens immunoglobulin heavy chai...    30   6.7  

>AF471259-1|AAQ05434.1|  122|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 122

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 551 ENVNLSAYMQ-DCVKISDALILYCLREGR 634
           EN   S Y+Q D +++ D  + YC REGR
Sbjct: 72  ENAMNSLYLQIDSLRVGDTAVYYCAREGR 100


>Y12042-1|CAA72773.1|   90|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 90

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 551 ENVNLSAYMQ-DCVKISDALILYCLREGRVQELKLIAHSIPW 673
           +N   S Y+Q   ++  D  + YC REG +  L + +   PW
Sbjct: 49  DNARNSLYLQMSSLRAEDTAVYYCAREGNILPLTVTSWFDPW 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,244,313
Number of Sequences: 237096
Number of extensions: 2050162
Number of successful extensions: 4188
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4188
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)