Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120662.seq
(686 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 24 1.2
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 23 2.7
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 2.7
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 2.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 4.8
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 8.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.3
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/39 (25%), Positives = 17/39 (43%)
Frame = +2
Query: 143 GSAYRANVTDAPILFTCFATNWIGKLFQFCRCR*QSPKV 259
G Y + T PIL+ + + + CRC +P +
Sbjct: 302 GCLYYFSTTINPILYNVMSAKYRNAFKETCRCSPSNPSI 340
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 123 IEQIDTIVGRFDGQFNYFYIFF 58
++QIDT+ + NY Y+ +
Sbjct: 345 VKQIDTVAAEWPATTNYLYLTY 366
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 666 MLWAINFSSCTRPSR 622
+L+ + SSCTRPSR
Sbjct: 7 LLFFLLLSSCTRPSR 21
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 666 MLWAINFSSCTRPSR 622
+L+ + SSCTRPSR
Sbjct: 7 LLFFLLLSSCTRPSR 21
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.8
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 210 LENYFNFAVVDNNRQRFKSHLIWSLVSEQKFLTQDFILAFGDLLDMEEISKNYNNLVLSV 389
L+ + NF N + + + +L + +T+ L+ D +++ I+ NY NLV
Sbjct: 576 LDIHGNFIESLGNYYKIRDSKVKTLDASHNRITELSPLSVPDSVELLFINNNYINLVR-- 633
Query: 390 QQKYAHKLNWKRI 428
+ K+N R+
Sbjct: 634 PNTFTDKVNLTRV 646
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -1
Query: 344 VQQVAKREYKILRQKFLLRHQ 282
VQQ ++EY+ L++K +L ++
Sbjct: 45 VQQEREQEYEKLKRKMILEYE 65
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 313 SCVKNFCSDTNDQIKCDLNLWRLLSTTAKL 224
SC NF +D +C L + L TT ++
Sbjct: 162 SCAMNFLIYPHDTQECKLQMESLSHTTDEM 191
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 344 VQQVAKREYKILRQKFLLRHQ 282
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 344 VQQVAKREYKILRQKFLLRHQ 282
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 344 VQQVAKREYKILRQKFLLRHQ 282
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 344 VQQVAKREYKILRQKFLLRHQ 282
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 344 VQQVAKREYKILRQKFLLRHQ 282
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 344 VQQVAKREYKILRQKFLLRHQ 282
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 344 VQQVAKREYKILRQKFLLRHQ 282
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -1
Query: 344 VQQVAKREYKILRQKFLLRHQ 282
+QQ +RE++ L++K +L ++
Sbjct: 44 IQQEREREHERLKKKMILEYE 64
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,059
Number of Sequences: 438
Number of extensions: 4323
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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