Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120659.seq
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   5.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -3

Query: 493 YLKTLKIYYFNSAERIPFGIISIYCRHNNAHFSKITTVLLIVKFVS*FIFLSY 335
           +L +L+IY  ++     FG ++  C  +N   SK+  +  I+  V    F+SY
Sbjct: 10  FLNSLQIYLQHNQI---FGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFVSY 59


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -3

Query: 493 YLKTLKIYYFNSAERIPFGIISIYCRHNNAHFSKITTVLLIVKFVS*FIFLSY 335
           +L +L+IY  ++     FG ++  C  +N   SK+  +  I+  V    F+SY
Sbjct: 28  FLNSLQIYLQHNQI---FGFVTFTCTRSNFRSSKLLILYNIILQVLFVSFVSY 77


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -1

Query: 558 HEKIDSWASKCNPTNLNS 505
           HE++ +  ++C+P +L+S
Sbjct: 324 HEELSAMVNRCHPLSLSS 341


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 484 SLNKYDPRIKICR 522
           S N Y P+IK CR
Sbjct: 57  SSNSYTPKIKSCR 69


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 472 IFLKSLNKYDPRIKICR 522
           + L S++KY PRI I +
Sbjct: 137 LVLSSMHKYQPRILIVK 153


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -2

Query: 209 YLLIMFILNTSLYLRV*SRGVKSFFIKYI 123
           Y+LI++IL + LY+   ++ V   F+K+I
Sbjct: 270 YVLILYILESLLYMV--TKLVVVTFLKFI 296


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 505 RIKICRITF*RPRIYLLVKSNT 570
           +I+ CR TF   R Y +  SNT
Sbjct: 249 KIEFCRPTFSAARFYGIDFSNT 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,581
Number of Sequences: 336
Number of extensions: 3303
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)