Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120659.seq
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   3.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 6   IRYLYFFFLQNVQETSYRGTKK*IKGTFHLD 98
           +RY  FFFL ++ E++ +  +  + G   LD
Sbjct: 616 MRYKMFFFLSSMDESNTKSYEIPLYGKMTLD 646


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 6   IRYLYFFFLQNVQETSYRGTKK*IKGTFHLD 98
           +RY  FFFL ++ E++ +  +  + G   LD
Sbjct: 616 MRYKMFFFLSSMDESNTKSYEIPLYGKMTLD 646


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = +2

Query: 272 PFSGP-CTISLLKI--ISIRCSVVIRKKNKSTN 361
           P+SG  CT ++     I+++CS+V   +NK+ N
Sbjct: 64  PYSGSKCTWTITSYHRINLKCSLVEFSENKNCN 96


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 569 QGFSYFTISNIRIVSKY*Y 625
           +GF Y+T+  IR V+++ Y
Sbjct: 138 RGFVYYTMGQIREVARHFY 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,583
Number of Sequences: 438
Number of extensions: 4001
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)