Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120658.seq
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.1  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   4.1  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.1  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   5.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.2  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 355 PALQGYRRCLRPYP 396
           P +  YR C RPYP
Sbjct: 251 PYVPFYRYCYRPYP 264


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 132 VIPHPRVPQLPPRHIHL 182
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 132 VIPHPRVPQLPPRHIHL 182
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 132 VIPHPRVPQLPPRHIHL 182
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -3

Query: 682 DRRIHAGHLPYRTSAARRVRAKSKGVTRSTERWLRRHHRR 563
           D  + +   P   +AA R+        + TER   RH  R
Sbjct: 530 DSSVESRVWPRAAAAAERLWTNPSDYVKQTERRFYRHRER 569


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 676 RIHAGHLPYRTSAARRVRAKSKGVTR 599
           R H+G  PYR    ++  + S  +T+
Sbjct: 70  RTHSGERPYRCRLCKKAFSDSSTLTK 95



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 676 RIHAGHLPYRTSAARRVRAKSKGVT 602
           R H+G  P+R     R  ++S  VT
Sbjct: 42  RTHSGEKPFRCPVCDRRFSQSSSVT 66


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 676 RIHAGHLPYRTSAARRVRAKSKGVTR 599
           R H+G  PYR    ++  + S  +T+
Sbjct: 326 RTHSGERPYRCRLCKKAFSDSSTLTK 351



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 676 RIHAGHLPYRTSAARRVRAKSKGVT 602
           R H+G  P+R     R  ++S  VT
Sbjct: 298 RTHSGEKPFRCPVCDRRFSQSSSVT 322


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 14/53 (26%), Positives = 18/53 (33%)
 Frame = +2

Query: 530 RSSGVTSLVIWXXXXXXXXXLCASCNPLRLRTYPSRRRCSVREMASVNSPVSE 688
           +S G    + W         LC   NPL    Y +    SV E     +P  E
Sbjct: 359 KSKGYGGAMTWAIDMDDFHGLCGPKNPLINILYANMNSYSVPEPTISTTPRPE 411


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 135 IPHPRVPQLPP 167
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 135 IPHPRVPQLPP 167
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,963
Number of Sequences: 336
Number of extensions: 2702
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)