Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120658.seq
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 109 3e-25
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 63 4e-11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 49 6e-07
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 5e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 38 0.001
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 36 0.004
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 31 0.12
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 30 0.36
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.84
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 28 1.1
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 26 4.5
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.5
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 7.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 109 bits (263), Expect = 3e-25
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 433
G+SAAVSKTA APIER KLL+Q Q + + RYKGI + F R E+G++S WRGN
Sbjct: 35 GVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGN 94
Query: 434 FANVIRYFPTQALNFAFKDKYKQVF 508
ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 95 TANVLRYFPTQALNFAFKDKFKKMF 119
Score = 30.3 bits (65), Expect = 0.28
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V ++ + L S + ++++ G+VD + + + GL +RG
Sbjct: 140 GAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFG 199
Query: 437 ANVIRYFPTQALNFAFKDKYKQV 505
+V+ + L F D K V
Sbjct: 200 PSVVGIVVYRGLYFGMYDTLKPV 222
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 62.9 bits (146), Expect = 4e-11
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G++A VS+TAV+P+ER K++ QVQ+ ++ Y + V+I +GL+ F+RGN
Sbjct: 28 GVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNG 80
Query: 437 ANVIRYFPTQALNFAFKDKYKQ 502
N +R FP A+ FA + KQ
Sbjct: 81 TNCLRAFPYGAVQFATFNMLKQ 102
Score = 33.5 bits (73), Expect = 0.030
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + + +T P + + QV + YK I A I K +G+ F+RG
Sbjct: 234 GFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYS 290
Query: 437 ANVIRYFPTQALNF 478
+N+++ P ++ +
Sbjct: 291 SNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 49.2 bits (112), Expect = 6e-07
Identities = 29/91 (31%), Positives = 49/91 (53%)
Frame = +2
Query: 233 VR*GLPGCGISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 412
V+ G+ G G + V+K+ VAP++R K+L Q H S + A R+ G+ A I GL
Sbjct: 18 VKSGIAG-GTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGL 75
Query: 413 LSFWRGNFANVIRYFPTQALNFAFKDKYKQV 505
++G+ A + R FP + F ++ ++V
Sbjct: 76 HGLYQGHTATLYRVFPYAGIKFVAYEQVRRV 106
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 39.5 bits (88), Expect = 5e-04
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +2
Query: 362 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFSAVLTRRRSSG 541
Y G D +I K +G +RG ++ P +AL FA D Y +++ V R+ SS
Sbjct: 45 YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSP 104
Query: 542 VTSLV 556
S++
Sbjct: 105 ALSIL 109
Score = 32.3 bits (70), Expect = 0.068
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 GISAAVSKT-AVAPIERXKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
G A ++T V P E K+ LQ V++ SK Y G VD F +I K++ +L+ + G
Sbjct: 111 GSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNG 163
Query: 431 NFANVIRYFPTQALNFAFKDKYKQVFSAVLTR 526
A + R+ A F K + + +R
Sbjct: 164 FEATMWRHVVWNAGYFGVIQKIRNSLTPASSR 195
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 37.9 bits (84), Expect = 0.001
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = +2
Query: 260 ISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 439
+S + T V P+ + LQ Q S A Y G +D F + K +G ++G
Sbjct: 344 LSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSP 400
Query: 440 NVIRYFPTQALNFAFKDKYKQ 502
N+++ P+ A+++ + K+
Sbjct: 401 NLLKVAPSVAISYLVYENCKK 421
Score = 31.1 bits (67), Expect = 0.16
Identities = 19/92 (20%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGN 433
G++ +V++ + P++ K +Q +S+ Q K I+ + + + K G+ ++RG
Sbjct: 236 GMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGV 291
Query: 434 FANVIRYFPTQALNFAFKDKYKQVFSAVLTRR 529
++ FP A + + K+ + +L R
Sbjct: 292 LVGILGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 36.3 bits (80), Expect = 0.004
Identities = 23/87 (26%), Positives = 44/87 (50%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G+S A++ + P++ K LLQ + S I ++ KG +D I G+ SF++G
Sbjct: 212 GLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGIR 270
Query: 437 ANVIRYFPTQALNFAFKDKYKQVFSAV 517
++ P A+++A + K++ V
Sbjct: 271 PRMVVAMPATAVSWAAYEAGKEILIRV 297
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +2
Query: 245 LPGCGISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 424
L G GI+ ++ P E + L+ S I +Y G++ F + EQG++ +
Sbjct: 276 LGGAGIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLY 332
Query: 425 RGNFANVIRYFPTQALNF 478
G A+++R P + F
Sbjct: 333 GGLTAHLLRVVPNACILF 350
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 29.9 bits (64), Expect = 0.36
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 338 KQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 505
+ ++A + YK + +I + GLL FW G + R + + F +K ++
Sbjct: 232 QSLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.7 bits (61), Expect = 0.84
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 347 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 445
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWR 427
G + S VAP++ K Q Q + G + + I +G+ +R
Sbjct: 13 GAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYR 72
Query: 428 GNFANVIRYFPTQALNFAFKDKYKQVF 508
G ++ Y P+ ++ F +K K +F
Sbjct: 73 GVGPMMLGYLPSWSIYFVVYEKCKVLF 99
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/83 (22%), Positives = 35/83 (42%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
GIS+ + + +AP + K+ +Q+ S + F +++G+ + WRGN
Sbjct: 24 GISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEGVRALWRGNV 72
Query: 437 ANVIRYFPTQALNFAFKDKYKQV 505
+ Y A F K K +
Sbjct: 73 VAELLYLVYGAAEFVAFSKLKHL 95
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 254 CGISAAVSKTAV-APIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 430
CG++A V + V P+E K Q+ +++ + + +GL F+RG
Sbjct: 89 CGMTAEVVSSFVWTPLEVIKARTQISQKGS----------VINTISTLARSEGLKGFYRG 138
Query: 431 NFANVIRYFPT 463
+ V Y PT
Sbjct: 139 YWMGVAIYLPT 149
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 83 YEITPNLLFKNQELVFRDPPSACAATPTSTY 175
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.4 bits (53), Expect = 7.9
Identities = 21/98 (21%), Positives = 40/98 (40%)
Frame = +2
Query: 242 GLPGCGISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 421
GL CG + +A+ P++ K QV Y G + F I ++GL
Sbjct: 30 GLLACG----TTHSAITPLDLIKCRKQVN--------PNIYPGNIAGFKTILSKEGLRGL 77
Query: 422 WRGNFANVIRYFPTQALNFAFKDKYKQVFSAVLTRRRS 535
+ G +I Y + F + +K +S ++ +++
Sbjct: 78 YTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKA 115
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,449,498
Number of Sequences: 5004
Number of extensions: 44152
Number of successful extensions: 137
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -