Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120658.seq
(693 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 155 5e-40
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 155 5e-40
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 6.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 6.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 6.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 6.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 6.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 6.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 6.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 6.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.4
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 155 bits (375), Expect = 5e-40
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G++AA+SKT VAPIER KLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN
Sbjct: 18 GVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77
Query: 437 ANVIRYFPTQALNFAFKDKYKQVF 508
ANVIRYFPTQALNFAFKDKYKQVF
Sbjct: 78 ANVIRYFPTQALNFAFKDKYKQVF 101
Score = 44.8 bits (101), Expect = 8e-07
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = +1
Query: 520 DKKTQFWRYFXXXXXXXXXXXXTSLCFXXXXXXXXXXXXXXMFGKGDGQREFSGLGNC 693
DK TQF RYF TSLCF + GK G+REF+GLGNC
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADV-GKAGGEREFTGLGNC 162
Score = 33.5 bits (73), Expect = 0.002
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 207 MSNLADPVAFAKDFLA 254
MS LADPVAFAKDFLA
Sbjct: 1 MSGLADPVAFAKDFLA 16
Score = 26.2 bits (55), Expect = 0.30
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 302 RXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 451
R ++++Q +I YK + + I K +G +F++G F+N++R
Sbjct: 237 RRRMMMQSGRAKSEIL----YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 1.6
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V P++ + L V K ++ + G+ + +I K G+ +RG
Sbjct: 123 GAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFG 180
Query: 437 ANVIRYFPTQALNFAFKD 490
+V +A F F D
Sbjct: 181 VSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 155 bits (375), Expect = 5e-40
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G++AA+SKT VAPIER KLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN
Sbjct: 18 GVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNL 77
Query: 437 ANVIRYFPTQALNFAFKDKYKQVF 508
ANVIRYFPTQALNFAFKDKYKQVF
Sbjct: 78 ANVIRYFPTQALNFAFKDKYKQVF 101
Score = 44.8 bits (101), Expect = 8e-07
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = +1
Query: 520 DKKTQFWRYFXXXXXXXXXXXXTSLCFXXXXXXXXXXXXXXMFGKGDGQREFSGLGNC 693
DK TQF RYF TSLCF + GK G+REF+GLGNC
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADV-GKAGGEREFTGLGNC 162
Score = 33.5 bits (73), Expect = 0.002
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 207 MSNLADPVAFAKDFLA 254
MS LADPVAFAKDFLA
Sbjct: 1 MSGLADPVAFAKDFLA 16
Score = 26.2 bits (55), Expect = 0.30
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 302 RXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 451
R ++++Q +I YK + + I K +G +F++G F+N++R
Sbjct: 237 RRRMMMQSGRAKSEIL----YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 1.6
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +2
Query: 257 GISAAVSKTAVAPIERXKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 436
G + A S V P++ + L V K ++ + G+ + +I K G+ +RG
Sbjct: 123 GAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFG 180
Query: 437 ANVIRYFPTQALNFAFKD 490
+V +A F F D
Sbjct: 181 VSVQGIIIYRAAYFGFYD 198
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 631 RVRAKSKGVTRSTERWLRRHHRRPDYQR 548
R R K + + E WL + R ++QR
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQR 55
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,783
Number of Sequences: 438
Number of extensions: 3267
Number of successful extensions: 34
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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