Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120656.seq
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.4  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   9.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.5  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 475 CKNCMLLRQFYHDFLFV-CFIDLFVIMINYKFFVGVNIXSVIRI 603
           C N   LR  Y  F+FV  F  + ++M NY F   + + SV+ I
Sbjct: 87  CDNEPKLRH-YLIFIFVNVFFWVIILMSNYAFTRIILLKSVLEI 129


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 615 KNVVNAYDAXDVDPNKKFIIN 553
           KNV  AY    +D N +F+++
Sbjct: 92  KNVTRAYCNKKIDRNLQFVVS 112


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 615 KNVVNAYDAXDVDPNKKFIIN 553
           KNV  AY    +D N +F+++
Sbjct: 92  KNVTRAYCNKKIDRNLQFVVS 112


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 499 QFYHDFLFVCFIDLFVIMINYKFFVGVNIXSV 594
           +FY  F    F    +  +N+ FFV V +  V
Sbjct: 143 EFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLV 174


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 499 QFYHDFLFVCFIDLFVIMINYKFFVGVNIXSV 594
           +FY  F    F    +  +N+ FFV V +  V
Sbjct: 143 EFYKQFAIEYFQMYVLFFVNFAFFVVVKMLLV 174


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 493 LRQFYHDFLFVCFIDLFVIMIN 558
           LR+F+ + LF C  + ++ + N
Sbjct: 144 LRKFFDELLFKCMKEKWIPLCN 165


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 493 LRQFYHDFLFVCFIDLFVIMIN 558
           LR+F+ + LF C  + ++ + N
Sbjct: 377 LRKFFDELLFKCMKEKWIPLCN 398


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 493 LRQFYHDFLFVCFIDLFVIMIN 558
           LR+F+ + LF C  + ++ + N
Sbjct: 377 LRKFFDELLFKCMKEKWIPLCN 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,682
Number of Sequences: 336
Number of extensions: 2351
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)