Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120656.seq
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063136-1|AAH63136.1|  538|Homo sapiens NEB protein protein.          30   6.7  
AK056994-1|BAB71337.1|  500|Homo sapiens protein ( Homo sapiens ...    30   6.7  

>BC063136-1|AAH63136.1|  538|Homo sapiens NEB protein protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
 Frame = +1

Query: 262 RVKHDQE-MTSXVFQN*TG------FTSRILRVKHNQE-VMSFVFQN*TG------FTSR 399
           RVKH+QE ++S +++   G       T  + RVKHNQE + S +++   G       T  
Sbjct: 72  RVKHNQENLSSVLYKENMGKGTPLPVTPEMERVKHNQENISSVLYKENMGKGTPLPVTPE 131

Query: 400 ILRVKHNQ 423
           + RVKHNQ
Sbjct: 132 MERVKHNQ 139



 Score = 29.9 bits (64), Expect = 8.9
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
 Frame = +1

Query: 262 RVKHDQE-MTSXVFQN*TG------FTSRILRVKHNQE-VMSFVFQN*TG------FTSR 399
           RVKH+QE ++S +++   G       T  + RVKHNQE + S +++   G       T  
Sbjct: 103 RVKHNQENISSVLYKENMGKGTPLPVTPEMERVKHNQENISSVLYKENMGKGTPLPVTPE 162

Query: 400 ILRVKHNQ 423
           + RVKHNQ
Sbjct: 163 MERVKHNQ 170


>AK056994-1|BAB71337.1|  500|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32432 fis, clone SKMUS2001157, highly similar to
           Homo sapiens nebulin (NEB) gene. ).
          Length = 500

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
 Frame = +1

Query: 262 RVKHDQE-MTSXVFQN*TG------FTSRILRVKHNQE-VMSFVFQN*TG------FTSR 399
           RVKH+QE ++S +++   G       T  + RVKHNQE + S +++   G       T  
Sbjct: 34  RVKHNQENLSSVLYKENMGKGTPLPVTPEMERVKHNQENISSVLYKENMGKGTPLPVTPE 93

Query: 400 ILRVKHNQ 423
           + RVKHNQ
Sbjct: 94  MERVKHNQ 101



 Score = 29.9 bits (64), Expect = 8.9
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
 Frame = +1

Query: 262 RVKHDQE-MTSXVFQN*TG------FTSRILRVKHNQE-VMSFVFQN*TG------FTSR 399
           RVKH+QE ++S +++   G       T  + RVKHNQE + S +++   G       T  
Sbjct: 65  RVKHNQENISSVLYKENMGKGTPLPVTPEMERVKHNQENISSVLYKENMGKGTPLAVTPE 124

Query: 400 ILRVKHNQ 423
           + RVKHNQ
Sbjct: 125 MERVKHNQ 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,618,452
Number of Sequences: 237096
Number of extensions: 1088195
Number of successful extensions: 1055
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)