Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120655.seq
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1289 + 25531531-25531995                                         30   2.0  
02_05_0433 - 28939817-28940146                                         29   3.5  
01_06_0668 + 31058497-31059510,31059609-31059676,31060189-310602...    29   4.6  
06_03_1494 + 30554997-30555608,30555707-30555915,30556006-305561...    28   8.1  
06_02_0352 + 15083174-15083433,15083973-15084108                       28   8.1  
04_01_0206 + 2507827-2508705,2508844-2509902                           28   8.1  

>07_03_1289 + 25531531-25531995
          Length = 154

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -2

Query: 129 SKASPTEIARRPTACPFEPASFAVCTCSRQT 37
           SK  PT  A RPTA    PA   V  C  QT
Sbjct: 99  SKLQPTPAAARPTATGAPPAMVVVSACQFQT 129


>02_05_0433 - 28939817-28940146
          Length = 109

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/51 (29%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = -3

Query: 161 HNIDGRQVDCGRRHLQQRSHGVQQRVRLNLRHLRSARVVVKRGF-EQFEQR 12
           H +D R+ +   RH Q+R+  ++Q+ R +++ L   R+++++ + E+ EQR
Sbjct: 32  HRLDVRRQEALERHAQERA-AIEQQWRQSMQALERERLMLEQAWMEREEQR 81


>01_06_0668 +
           31058497-31059510,31059609-31059676,31060189-31060270,
           31060339-31060431,31060516-31060668,31060900-31060968,
           31061091-31061184,31061594-31061677,31062133-31062221,
           31062340-31062456,31062567-31062707,31062823-31063005
          Length = 728

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 212 NSAVTKRGFTARQTPTLEELLIERGEKIQ 298
           +SAV   GF A  TP L+ELL E  +++Q
Sbjct: 444 DSAVYGAGFYASATPQLDELLKEASKQVQ 472


>06_03_1494 +
           30554997-30555608,30555707-30555915,30556006-30556155,
           30556254-30556312,30556852-30556961,30557216-30557322,
           30557443-30557581,30557705-30557821,30557918-30558025,
           30558221-30558292,30558783-30558948,30559044-30559165,
           30559245-30559382,30559462-30559604,30559699-30559761,
           30560107-30560170,30560238-30560373,30560478-30560551,
           30560640-30560734,30560829-30560860,30560973-30561175
          Length = 972

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -1

Query: 586 ELPNICLTRLGRLNFCCCVS*YFPSPKYVIVILNVELAI---GHGIVFHGRVKHGIGRIV 416
           +L  IC   LG ++ CCC    F   K ++  L +++ +   G   V    V   I  + 
Sbjct: 618 DLKRICEIDLGLVSQCCCTKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVT 677

Query: 415 IHPT 404
             PT
Sbjct: 678 DRPT 681


>06_02_0352 + 15083174-15083433,15083973-15084108
          Length = 131

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 19  SNCSKPRLTTTRADRK*RRFKRTRCWTPCDLCWRCLR 129
           + C    +  +  DR+   F  +R  T C  CW+C+R
Sbjct: 51  ATCGGEAVVPSPGDRRTVVFATSRATTFCRPCWKCMR 87


>04_01_0206 + 2507827-2508705,2508844-2509902
          Length = 645

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 122 HLQQRSHGVQQRVRLNLRHLRSARVVVKRGFEQF 21
           +LQ R H +++   L+L++  S   + KRG   F
Sbjct: 190 YLQDRDHRIREEEELSLQYAHSLHHICKRGIVNF 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,032,764
Number of Sequences: 37544
Number of extensions: 366793
Number of successful extensions: 1016
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)