Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120655.seq
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094669-1|AAM11022.1| 1122|Drosophila melanogaster GH03394p pro...    32   0.64 
AE014298-1481|AAF46623.2| 1122|Drosophila melanogaster CG32676-P...    32   0.64 
BT012673-1|AAT09323.1|  876|Drosophila melanogaster SD07102p pro...    31   1.1  
AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p pro...    31   1.1  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    31   1.1  
AL133503-1|CAB63507.1|  259|Drosophila melanogaster EG:BACH48C10...    31   1.5  
AE014298-383|AAF45771.1|  259|Drosophila melanogaster CG14050-PA...    31   1.5  
AY128464-1|AAM75057.1|  659|Drosophila melanogaster RE19005p pro...    30   2.6  
AY060958-1|AAL28506.1|  568|Drosophila melanogaster GM08907p pro...    30   2.6  
AE014296-1984|AAN11876.1|  649|Drosophila melanogaster CG6091-PC...    30   2.6  
AE014296-1983|AAF50041.1|  649|Drosophila melanogaster CG6091-PA...    30   2.6  
U31961-2|AAA84401.1|  515|Drosophila melanogaster protein ( Dros...    29   4.5  
BT023197-1|AAY55613.1|  592|Drosophila melanogaster IP03156p pro...    29   4.5  
AE014297-2276|AAF55366.1|  553|Drosophila melanogaster CG8953-PA...    29   4.5  
AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p pro...    29   6.0  
AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA...    29   6.0  

>AY094669-1|AAM11022.1| 1122|Drosophila melanogaster GH03394p
           protein.
          Length = 1122

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
 Frame = +3

Query: 192 PIMKYAKIVLLQNVASQRDKRPLLKNC*SSAARRYKCCSRNNTSTAVPKFRFATIQSF*T 371
           P+++ + I  L N+ S   K   +KN            S  N S+A P    +T      
Sbjct: 443 PVLEQSPIKSLSNLVSSPIKMTTIKNIPLPTTAATSSSSSCNCSSAAPSSSSSTSSGACA 502

Query: 372 --GCSNT*IRTRSVGCITMR-PIPCFTRPWKTM--PCPIASS 482
             GC    I  +   C+  R P P    P  T+  P P+A S
Sbjct: 503 TGGCQQDPIAAKLTSCLCTRLPTPSVAPPVATLVAPAPVARS 544


>AE014298-1481|AAF46623.2| 1122|Drosophila melanogaster CG32676-PA
           protein.
          Length = 1122

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
 Frame = +3

Query: 192 PIMKYAKIVLLQNVASQRDKRPLLKNC*SSAARRYKCCSRNNTSTAVPKFRFATIQSF*T 371
           P+++ + I  L N+ S   K   +KN            S  N S+A P    +T      
Sbjct: 443 PVLEQSPIKSLSNLVSSPIKMTTIKNIPLPTTAATSSSSSCNCSSAAPSSSSSTSSGACA 502

Query: 372 --GCSNT*IRTRSVGCITMR-PIPCFTRPWKTM--PCPIASS 482
             GC    I  +   C+  R P P    P  T+  P P+A S
Sbjct: 503 TGGCQQDPIAAKLTSCLCTRLPTPSVAPPVATLVAPAPVARS 544


>BT012673-1|AAT09323.1|  876|Drosophila melanogaster SD07102p
           protein.
          Length = 876

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = -3

Query: 203 FHNRTVETTCKRRPHNIDGRQVDCGRRHLQQRSHGVQQRVRLNLRHLRSARVVVKRGFEQ 24
           FH+R V   CK R H +D       R H   RS+  +   R+  R ++ +    +  FE 
Sbjct: 54  FHSRLVCQLCKMRGHGVDHCPDKWRRYHSTTRSN-TELDSRVQYRSVQCSYCAGRHSFEN 112

Query: 23  FEQRI 9
             QRI
Sbjct: 113 CRQRI 117


>AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p
           protein.
          Length = 1358

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = -3

Query: 203 FHNRTVETTCKRRPHNIDGRQVDCGRRHLQQRSHGVQQRVRLNLRHLRSARVVVKRGFEQ 24
           FH+R V   CK R H +D       R H   RS+  +   R+  R ++ +    +  FE 
Sbjct: 536 FHSRLVCQLCKMRGHGVDHCPDKWRRYHSTTRSN-TELDSRVQYRSVQCSYCAGRHSFEN 594

Query: 23  FEQRI 9
             QRI
Sbjct: 595 CRQRI 599


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
            protein.
          Length = 1734

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = -3

Query: 203  FHNRTVETTCKRRPHNIDGRQVDCGRRHLQQRSHGVQQRVRLNLRHLRSARVVVKRGFEQ 24
            FH+R V   CK R H +D       R H   RS+  +   R+  R ++ +    +  FE 
Sbjct: 912  FHSRLVCQLCKMRGHGVDHCPDKWRRYHSTTRSN-TELDSRVQYRSVQCSYCAGRHSFEN 970

Query: 23   FEQRI 9
              QRI
Sbjct: 971  CRQRI 975


>AL133503-1|CAB63507.1|  259|Drosophila melanogaster EG:BACH48C10.1
           protein.
          Length = 259

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -3

Query: 206 VFHNRTVETTCKRRPHNIDGRQVDCGRRHLQQRSHGVQQRVRLNLRHLRSA 54
           V+  RT ++TCKR   ++ GR  +   RHL+++     + V    R +R+A
Sbjct: 14  VYSERTRKSTCKRCHFDMAGRHSENLMRHLKRKHEDAYKSVLDEKREIRAA 64


>AE014298-383|AAF45771.1|  259|Drosophila melanogaster CG14050-PA
           protein.
          Length = 259

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -3

Query: 206 VFHNRTVETTCKRRPHNIDGRQVDCGRRHLQQRSHGVQQRVRLNLRHLRSA 54
           V+  RT ++TCKR   ++ GR  +   RHL+++     + V    R +R+A
Sbjct: 14  VYSERTRKSTCKRCHFDMAGRHSENLMRHLKRKHEDAYKSVLDEKREIRAA 64


>AY128464-1|AAM75057.1|  659|Drosophila melanogaster RE19005p
           protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +1

Query: 289 EDTNVAAATIHQQRYRNSVL------RRFRVFEQAAQTHRSVPAQSDVLQCGQYHVLHDH 450
           E + V+    H   +RN V+      RR  V+++ A+THR  P +S   +  ++H  H H
Sbjct: 32  EQSVVSQTHNHAHNHRNVVIDGQSPQRRGEVYDELARTHRCSPHKSTRSKRREHHEAHAH 91


>AY060958-1|AAL28506.1|  568|Drosophila melanogaster GM08907p
           protein.
          Length = 568

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +1

Query: 289 EDTNVAAATIHQQRYRNSVL------RRFRVFEQAAQTHRSVPAQSDVLQCGQYHVLHDH 450
           E + V+    H   +RN V+      RR  V+++ A+THR  P +S   +  ++H  H H
Sbjct: 32  EQSVVSQTHNHAHNHRNVVIDGQSPQRRGEVYDELARTHRCSPHKSTRSKRREHHEAHAH 91


>AE014296-1984|AAN11876.1|  649|Drosophila melanogaster CG6091-PC,
           isoform C protein.
          Length = 649

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +1

Query: 289 EDTNVAAATIHQQRYRNSVL------RRFRVFEQAAQTHRSVPAQSDVLQCGQYHVLHDH 450
           E + V+    H   +RN V+      RR  V+++ A+THR  P +S   +  ++H  H H
Sbjct: 32  EQSVVSQTHNHAHNHRNVVIDGQSPQRRGEVYDELARTHRCSPHKSTRSKRREHHEAHAH 91


>AE014296-1983|AAF50041.1|  649|Drosophila melanogaster CG6091-PA,
           isoform A protein.
          Length = 649

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +1

Query: 289 EDTNVAAATIHQQRYRNSVL------RRFRVFEQAAQTHRSVPAQSDVLQCGQYHVLHDH 450
           E + V+    H   +RN V+      RR  V+++ A+THR  P +S   +  ++H  H H
Sbjct: 32  EQSVVSQTHNHAHNHRNVVIDGQSPQRRGEVYDELARTHRCSPHKSTRSKRREHHEAHAH 91


>U31961-2|AAA84401.1|  515|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 515

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
 Frame = +3

Query: 12  SLFKLLETTFDDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNS 191
           SL+  L T  D +  +       T + L +    L  P  TV  +T       +  C  S
Sbjct: 294 SLYGSLTTIRDRWIRKISSAVEPTPSCLKSNTPSLPEPPLTVSFSTDLFWDKIYKPCTQS 353

Query: 192 -PIMKYAKIVLLQNVASQRDKRPLLKNC*SSAARRYKCCSRNNTSTAVPKF 341
            P+M    ++    V  ++  + L   C  S   +YK  SR++T+  VPK+
Sbjct: 354 NPVMPNTSLI---PVLPKKQPKSLQLTCEPSV--QYKVASRSSTTAPVPKY 399


>BT023197-1|AAY55613.1|  592|Drosophila melanogaster IP03156p
           protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
 Frame = +3

Query: 12  SLFKLLETTFDDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNS 191
           SL+  L T  D +  +       T + L +    L  P  TV  +T       +  C  S
Sbjct: 371 SLYGSLTTIRDRWIRKISSAVEPTPSCLKSNTPSLPEPPLTVSFSTDLFWDKIYKPCTQS 430

Query: 192 -PIMKYAKIVLLQNVASQRDKRPLLKNC*SSAARRYKCCSRNNTSTAVPKF 341
            P+M    ++    V  ++  + L   C  S   +YK  SR++T+  VPK+
Sbjct: 431 NPVMPNTSLI---PVLPKKQPKSLQLTCEPSV--QYKVASRSSTTAPVPKY 476


>AE014297-2276|AAF55366.1|  553|Drosophila melanogaster CG8953-PA
           protein.
          Length = 553

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
 Frame = +3

Query: 12  SLFKLLETTFDDYTCRPQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSSFARCFNS 191
           SL+  L T  D +  +       T + L +    L  P  TV  +T       +  C  S
Sbjct: 332 SLYGSLTTIRDRWIRKISSAVEPTPSCLKSNTPSLPEPPLTVSFSTDLFWDKIYKPCTQS 391

Query: 192 -PIMKYAKIVLLQNVASQRDKRPLLKNC*SSAARRYKCCSRNNTSTAVPKF 341
            P+M    ++    V  ++  + L   C  S   +YK  SR++T+  VPK+
Sbjct: 392 NPVMPNTSLI---PVLPKKQPKSLQLTCEPSV--QYKVASRSSTTAPVPKY 437


>AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p
           protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 312 NNTSTAVPKFRFATIQSF*TGCSNT*IRTRSVGCITM 422
           NN++TAV K RF  +Q + T  S+  +R + V CI +
Sbjct: 204 NNSTTAVEKLRFTVLQ-YVTYYSHVPLRVQKVECIAV 239


>AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA
           protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 312 NNTSTAVPKFRFATIQSF*TGCSNT*IRTRSVGCITM 422
           NN++TAV K RF  +Q + T  S+  +R + V CI +
Sbjct: 204 NNSTTAVEKLRFTVLQ-YVTYYSHVPLRVQKVECIAV 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,615,857
Number of Sequences: 53049
Number of extensions: 649190
Number of successful extensions: 2213
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2213
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)