Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120654.seq
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   4.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   4.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 519 DTTAPVSVRGWEDATFEKY 575
           DT A +S+ GW D+  +KY
Sbjct: 705 DTKAILSLGGWTDSAGDKY 723



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 534  VSVRGWEDATFEKYLQSITSIS 599
            V++ GW D+  +KY + + + S
Sbjct: 1898 VAIGGWNDSAGDKYSRLVNNPS 1919


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/40 (22%), Positives = 17/40 (42%)
 Frame = +2

Query: 8   IIMFVTRLEHTTQFLPQACKLEDEVLVLYAIYLNGFDYTL 127
           +   + R +H        C+L  E L  + + L  +DY +
Sbjct: 665 VTKIIIRTDHQALKFLSRCRLLSERLTRWTLILGQYDYEI 704


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 441 LHVGSTIEHTNHNQVNSERFGFQ 509
           +HVG+T+   N N +N+    F+
Sbjct: 71  VHVGTTLVKVNINSINTGGLTFE 93


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 682 DSTVSDQYDAATSRQMYFLENTCRLITSLMDVIDCKYFS 566
           +S +   Y  AT    YFLE +     +  +V  C Y+S
Sbjct: 81  ESNMISFYLEATDDFAYFLEVSNNNFKTYSNVTTCSYYS 119


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 328 DLGTQAVAFLNRDRSSYQFWLDLYS 254
           D+G      +N +    +FW D+Y+
Sbjct: 484 DIGENITVGVNPEPERMKFWADIYN 508


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 328 DLGTQAVAFLNRDRSSYQFWLDLYS 254
           D+G      +N +    +FW D+Y+
Sbjct: 486 DIGENITVGVNPEPERMKFWADIYN 510


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 328 DLGTQAVAFLNRDRSSYQFWLDLYS 254
           D+G      +N +    +FW D+Y+
Sbjct: 484 DIGENITVGVNPEPERMKFWTDIYN 508


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 328 DLGTQAVAFLNRDRSSYQFWLDLYS 254
           D+G      +N +    +FW D+Y+
Sbjct: 486 DIGENITVGVNPEPERMKFWTDIYN 510


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -1

Query: 215 NVQNQIFLCCSRI*EIHRRSLALRALQNEVACNRTRLNRLRTK 87
           NVQ   F    ++ +IH     + +L+     N   L RL  K
Sbjct: 106 NVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLK 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,312
Number of Sequences: 336
Number of extensions: 3648
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)