Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120654.seq
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    26   0.30 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           26   0.30 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.8  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 53  PQACKLEDEVLVLYAIYLNGFDYTLPR 133
           P+A KL DE   L A Y   ++YT+P+
Sbjct: 354 PEALKLLDENWDLIAPYFLDYNYTIPK 380


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 53  PQACKLEDEVLVLYAIYLNGFDYTLPR 133
           P+A KL DE   L A Y   ++YT+P+
Sbjct: 354 PEALKLLDENWDLIAPYFLDYNYTIPK 380


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 546 GWEDATFEKYLQSITSISEVIKRHVFSKKYICL 644
           G  DA F + L+   +  +V+K  V  K  ICL
Sbjct: 61  GSPDAMFSQVLKKAENFKDVVKIWVGPKLVICL 93


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +2

Query: 41  TQFLPQACKLEDEVLVLYAIYLNGFDYT--LPRFVKREVQVNADGFLR 178
           T F     +L  EV +LY I L   DY   L       V VN   FL+
Sbjct: 91  TTFSNSISQLRKEVSLLYRILLGAKDYQTFLKTAAWARVHVNEGQFLK 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,056
Number of Sequences: 438
Number of extensions: 4228
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)