Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120652.seq
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein pr...    31   3.0  
BC037496-1|AAH37496.1|  504|Homo sapiens DYNC2H1 protein protein.      31   3.0  
AK131453-1|BAD18598.1| 1300|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AK095579-1|BAC04578.1|  806|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AK021818-1|BAB13905.1|  553|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.     31   3.0  

>BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein
            protein.
          Length = 1732

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 272  HAIWSMCWIWSACSNVDLYLPSTWTR 195
            HA++S+ W  +AC     Y+P  WT+
Sbjct: 1287 HALFSLAWFHAACQERRNYIPQGWTK 1312


>BC037496-1|AAH37496.1|  504|Homo sapiens DYNC2H1 protein protein.
          Length = 504

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 272 HAIWSMCWIWSACSNVDLYLPSTWTR 195
           HA++S+ W  +AC     Y+P  WT+
Sbjct: 108 HALFSLAWFHAACQERRNYIPQGWTK 133


>AK131453-1|BAD18598.1| 1300|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16607 fis, clone TESTI4010382, highly  similar
           to Rattus norvegicus dynein, cytoplasmic, heavy chain 2
           (Dnch2). ).
          Length = 1300

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 272 HAIWSMCWIWSACSNVDLYLPSTWTR 195
           HA++S+ W  +AC     Y+P  WT+
Sbjct: 855 HALFSLAWFHAACQERRNYIPQGWTK 880


>AK095579-1|BAC04578.1|  806|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38260 fis, clone FCBBF3001377, highly similar to
           Rattus norvegicus dnchc2 mRNA for cytoplasmic dynein
           heavy ).
          Length = 806

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 272 HAIWSMCWIWSACSNVDLYLPSTWTR 195
           HA++S+ W  +AC     Y+P  WT+
Sbjct: 361 HALFSLAWFHAACQERRNYIPQGWTK 386


>AK021818-1|BAB13905.1|  553|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11756 fis, clone HEMBA1005595, weakly similar to
           DYNEIN HEAVY CHAIN, CYTOSOLIC. ).
          Length = 553

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 272 HAIWSMCWIWSACSNVDLYLPSTWTR 195
           HA++S+ W  +AC     Y+P  WT+
Sbjct: 108 HALFSLAWFHAACQERRNYIPQGWTK 133


>AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.
          Length = 1685

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 272  HAIWSMCWIWSACSNVDLYLPSTWTR 195
            HA++S+ W  +AC     Y+P  WT+
Sbjct: 1240 HALFSLAWFHAACQERRNYIPQGWTK 1265


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,265,343
Number of Sequences: 237096
Number of extensions: 2260090
Number of successful extensions: 4802
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4802
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)