Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120652.seq
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    26   0.39 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    26   0.39 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    26   0.39 
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   4.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.8  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   6.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   8.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 537 SLILFANEMIVARRDAETARQDCENAXRETAHWANRMADIAQDVIAKPSN 686
           SL+     +   RR  E ARQ   NA + T H   R AD A++ ++  +N
Sbjct: 213 SLVYLEIYLATRRRLRERARQSRINAVQSTRH---READDAEESVSSETN 259


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 537 SLILFANEMIVARRDAETARQDCENAXRETAHWANRMADIAQDVIAKPSN 686
           SL+     +   RR  E ARQ   NA + T H   R AD A++ ++  +N
Sbjct: 213 SLVYLEIYLATRRRLRERARQSRINAVQSTRH---READDAEESVSSETN 259


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 537 SLILFANEMIVARRDAETARQDCENAXRETAHWANRMADIAQDVIAKPSN 686
           SL+     +   RR  E ARQ   NA + T H   R AD A++ ++  +N
Sbjct: 213 SLVYLEIYLATRRRLRERARQSRINAVQSTRH---READDAEESVSSETN 259


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -3

Query: 609 FRNLAEPFQRRVEPQSFRWQTK*AIGLLPPNLRC 508
           FRN++E +Q          ++K  I  +  NL+C
Sbjct: 112 FRNISEKYQEIFNGYFLNSESKDFIDFIQKNLQC 145


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 235 HADQIQHMLQIAWQSRATRCICTH 306
           H D   H  QIAW +      C+H
Sbjct: 549 HRDTYIHAQQIAWMALKMIQACSH 572


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 193 IRVHVDGKYKSTFEHADQIQH 255
           + V+ DG Y + FE ++ I H
Sbjct: 34  LEVNFDGNYINNFETSNGISH 54


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 214 CRRRGHVLPVHNLHILNCWRCPWPQ 140
           CR + HV  +H+  ++  +R P  Q
Sbjct: 148 CRPKIHVFSLHDNKLITMYRFPQNQ 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,024
Number of Sequences: 438
Number of extensions: 4514
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)