Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120645.seq
         (691 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1588 - 28067972-28068058,28068149-28068479,28069632-28069864     30   1.5  
11_03_0026 - 9057965-9058234,9059410-9059522,9059612-9059802,906...    29   3.5  
10_02_0110 - 5371536-5372882                                           29   4.6  
02_01_0599 - 4455151-4455915,4455999-4456098,4456176-4456222,445...    29   4.6  
11_01_0755 - 6343084-6345172,6345526-6346367                           28   6.1  
02_05_0886 + 32507324-32507938,32508103-32508252,32508498-325089...    28   6.1  

>08_02_1588 - 28067972-28068058,28068149-28068479,28069632-28069864
          Length = 216

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +3

Query: 468 N*RSDAKIDGGQRSLAEATDRSFCLPTK*LWLDATLKRLGKIAKTRAAKTAHWANRMAD 644
           N  S+   D  + +L     R+ C P    W++   +  G IA+ R+A    WANR  D
Sbjct: 111 NLNSNPHADPAEDTLYRILSRNGCAPE---WVELNKEIRGMIARWRSALRKAWANRSED 166


>11_03_0026 -
           9057965-9058234,9059410-9059522,9059612-9059802,
           9060606-9060720,9061781-9061907,9062915-9062990,
           9064247-9064365,9065430-9065593,9065666-9065779,
           9065966-9066065,9066276-9066340,9068175-9068253,
           9069513-9069659,9069904-9070161,9070657-9070852,
           9071179-9071402,9072531-9072554
          Length = 793

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 326 HARFGNEHCVWVQIQRVALLCHA 258
           H  FG++H + VQ+Q  A++CHA
Sbjct: 203 HIVFGSQHNLPVQLQAKAVICHA 225


>10_02_0110 - 5371536-5372882
          Length = 448

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
 Frame = -1

Query: 328 ITPDLVMSTVCGCKY----SG-SPCFATLSEHGAGFGRHAQTSICTCRRRGHVLPVHNLH 164
           I+PD  +S +   +Y    +G S C+        G  R  Q S+CT R R H L VH   
Sbjct: 320 ISPDGKLSFIVTSRYFDGSAGVSSCYHLAFGSNGGCTRE-QVSVCTWRVRLHELRVHRSD 378

Query: 163 ILNC-WRC 143
            +N  W C
Sbjct: 379 AMNLRWFC 386


>02_01_0599 -
           4455151-4455915,4455999-4456098,4456176-4456222,
           4456566-4456612,4457299-4457461,4458013-4458042
          Length = 383

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 421 KYAPAVEMDTNDVIAKIDDLTQKLTVANAVWRK 519
           ++AP+VE    +V A I+ +T+K+ +    W+K
Sbjct: 304 RHAPSVEHSLAEVAAHIEAVTEKIIMEEEKWKK 336


>11_01_0755 - 6343084-6345172,6345526-6346367
          Length = 976

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 421 KYAPAVEMDTNDVIAKIDDLTQKL-TVANAVWRKQ 522
           +Y+P +E+D   ++ K D L   L +V N +WR++
Sbjct: 350 EYSPELELDLPSILEKCDGLPLALVSVGNFLWRER 384


>02_05_0886 +
           32507324-32507938,32508103-32508252,32508498-32508935,
           32509038-32509151,32509256-32509852
          Length = 637

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = -1

Query: 619 AVFAARVFAIL--PSRFS--VASSHNHFVGKQNERSVASAKLRW 500
           A  A  V A++  P++FS  +A++ N+F+GK  E S   +  +W
Sbjct: 584 AALAENVGAVMSDPNKFSAAIAAAINNFMGKDGESSSGKSSSKW 627


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,009,325
Number of Sequences: 37544
Number of extensions: 431606
Number of successful extensions: 1205
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)