Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120645.seq
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            30   0.060
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   5.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.1  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   9.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 30.3 bits (65), Expect = 0.060
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 288  NTAGRPALPRYRSMVLDLVGMLKRRFVLAV 199
            N A + AL RY+S V D+VG+L   F+ A+
Sbjct: 2431 NEAFKKALQRYKSNVPDIVGVLNHHFMTAL 2460


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 624 SAPFSRRAFSQSCRAVSASRRATIISLANKMSDRLLPPN 508
           S+P      +Q  + + A RR  ++S A K+  RLL PN
Sbjct: 17  SSPILNPEDTQKLQLLPAVRRP-LLSDAEKLEQRLLAPN 54


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +1

Query: 238 IQHHAPIAWQSRATRCICTHTQC 306
           + HH  +  Q R   C C + +C
Sbjct: 425 LHHHQQVHNQQRILYCFCRNVEC 447


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 689 HSCGLLGLAITFLRNVRHAVGPVR 618
           H C L G  +T +RN  H   P R
Sbjct: 500 HRCKLCGKVVTHIRNHYHVHFPGR 523


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = -2

Query: 588 CRAVSASRRAT-IISLANKMSDRL--LPPNCVGHR-QFLRQIVNFGNNII 451
           CR    SR    + + A+++++ L  L PN  G + +  RQ++N GN+II
Sbjct: 734 CRKQHHSRHLERVANKASRITNALTCLMPNKRGPKSRSRRQLINVGNSII 783


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,132
Number of Sequences: 2352
Number of extensions: 16134
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)