Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120645.seq
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK098748-1|BAC05402.1|  130|Homo sapiens protein ( Homo sapiens ...    31   2.9  
AF492460-1|AAN64030.1| 1322|Homo sapiens WD repeat 17 protein.         31   2.9  
AY279093-1|AAQ19182.1|  142|Homo sapiens chordin-related protein...    31   3.9  
X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain pro...    31   5.1  

>AK098748-1|BAC05402.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25882 fis, clone CBR02655. ).
          Length = 130

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = -1

Query: 685 AAGCWVWLSRSCAMSAMRLAQCAVFAARVFAILPSRFSVASSHNHFVGKQNERSVASAKL 506
           AAGC  W    CA S  R A CA  A  ++  L  R++    H   + +  +   A +  
Sbjct: 11  AAGCQPWNKDVCAASGDRFAYCATLAIYIYQ-LDHRYNEFKLH-AIMSEHKKTITAISWC 68

Query: 505 RWPPSIFAS 479
              P +FAS
Sbjct: 69  PHNPDLFAS 77


>AF492460-1|AAN64030.1| 1322|Homo sapiens WD repeat 17 protein.
          Length = 1322

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = -1

Query: 685 AAGCWVWLSRSCAMSAMRLAQCAVFAARVFAILPSRFSVASSHNHFVGKQNERSVASAKL 506
           AAGC  W    CA S  R A CA  A  ++  L  R++    H   + +  +   A +  
Sbjct: 35  AAGCQPWNKDVCAASGDRFAYCATLAIYIYQ-LDHRYNEFKLH-AIMSEHKKTITAISWC 92

Query: 505 RWPPSIFAS 479
              P +FAS
Sbjct: 93  PHNPDLFAS 101


>AY279093-1|AAQ19182.1|  142|Homo sapiens chordin-related protein 2
           variant VIII protein.
          Length = 142

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = -2

Query: 645 CPPCGWPSAPFSRRAFSQSCRAVSASRRATIISLANKMSDRLLPPNCVGHRQFLRQIVNF 466
           CP C  P  P   RA  +SC+      +   I  A+++    LP  CV     +RQ+ N 
Sbjct: 72  CPKCVEPHTPSGLRAPPKSCQHNGTMYQHGEIFSAHELFPSRLPNQCVLCSCTMRQVSNR 131

Query: 465 GNNIIC 448
               +C
Sbjct: 132 MKRTVC 137


>X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain
           protein.
          Length = 1798

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 651 AQCPPCGWPSAPFSRRAFSQSC 586
           AQC PC  P  P S+R F+ SC
Sbjct: 922 AQCRPCPCPEGPGSQRHFATSC 943


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,180,915
Number of Sequences: 237096
Number of extensions: 2096564
Number of successful extensions: 4572
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4572
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)