Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120640.seq
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   2.4  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   5.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.3  

>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +2

Query: 125 FIQNLWIVQRFYVSKR 172
           FI+N+W+   F+V+++
Sbjct: 118 FIKNIWVPDTFFVNEK 133


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 530 SAPRSCLVIVRTFYFHR 480
           + P  C V++ TF  HR
Sbjct: 81  TVPAGCTVVIGTFKVHR 97


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 524 PRSCLVIVRTFYFHRNP 474
           P+ C+V ++ +  H NP
Sbjct: 382 PKDCMVNLQIYDMHHNP 398


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 524 PRSCLVIVRTFYFHRNP 474
           P+ C+V ++ +  H NP
Sbjct: 382 PKDCMVNLQIYDMHHNP 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,268
Number of Sequences: 336
Number of extensions: 3974
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)