Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120640.seq
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.11 
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    27   0.56 
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         26   1.3  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         26   1.3  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         26   1.3  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   1.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.3  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    23   7.0  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 601 RHAPV*NGQNG-CALQANTAADVCDERAYG 687
           +HA + + + G C  Q NTA D CD+ A G
Sbjct: 731 KHAEICDSETGRCICQHNTAGDTCDQCAKG 760


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +3

Query: 495 CPYNYETRPWSRCVSSWGTAIASIA*NTPRCW 590
           CP   + +   +   SW   ++ +    PRCW
Sbjct: 26  CPIGIQLKDNGKTCKSWPLQLSGVCCTVPRCW 57


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 106 WRSNKDIHPKPLDRAEILRVE-KATRGQSKNELWTLLRLDR 225
           W SNKD+ PKP         E +  RG +++E     RL R
Sbjct: 148 WESNKDVFPKPCGNLTDSEKEIQQLRGGTRSEGRRTPRLKR 188


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 106 WRSNKDIHPKPLDRAEILRVE-KATRGQSKNELWTLLRLDR 225
           W SNKD+ PKP         E +  RG +++E     RL R
Sbjct: 148 WESNKDVFPKPCGNLTDSEKEIQQLRGGTRSEGRRTPRLKR 188


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 106 WRSNKDIHPKPLDRAEILRVE-KATRGQSKNELWTLLRLDR 225
           W SNKD+ PKP         E +  RG +++E     RL R
Sbjct: 148 WESNKDVFPKPCGNLTDSEKEIQQLRGGTRSEGRRTPRLKR 188


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 230 QRLHRPIRRQHVTTTSAFVWKRTRKSRQRNQRHHVRPH 343
           Q++ +P+ ++H+T        R RKS + + RH  + H
Sbjct: 290 QQMMKPMLQRHLTRNKRSQPARKRKSSKTDHRHPFQYH 327


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 201 VDAIAFGSQHSVCIVQFVGN 260
           V  + +GSQ  V ++QF GN
Sbjct: 763 VVVLIYGSQKEVTVLQFTGN 782


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 187 FVPWWPFRHVKSLHDPKVLDEYLCLNANETTALDSTRSFS 68
           F+  +P R V     PK+++E   +   E  A++   SFS
Sbjct: 147 FLEMFPTRFVDPALFPKLVEEGFVVQQGERVAIEVPPSFS 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,054
Number of Sequences: 2352
Number of extensions: 17925
Number of successful extensions: 114
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)