Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120640.seq
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065040-1|AAH65040.1| 290|Homo sapiens chromosome 1 open readi... 32 1.7
BC041843-1|AAH41843.1| 226|Homo sapiens C1orf63 protein protein. 32 1.7
BC001892-1|AAH01892.1| 290|Homo sapiens chromosome 1 open readi... 32 1.7
AL031432-3|CAB37992.1| 290|Homo sapiens chromosome 1 open readi... 32 1.7
AK027318-1|BAB55038.1| 242|Homo sapiens protein ( Homo sapiens ... 32 1.7
AF267856-1|AAG44725.1| 242|Homo sapiens HT033 protein. 32 1.7
AF247168-1|AAG44543.1| 242|Homo sapiens NPD014 protein. 32 1.7
AF406992-1|AAL11723.1| 2817|Homo sapiens A-kinase anchoring prot... 31 5.2
AF127481-1|AAD40799.1| 893|Homo sapiens non-ocogenic Rho GTPase... 31 5.2
AB209414-1|BAD92651.1| 1308|Homo sapiens A-kinase anchor protein... 31 5.2
AB055890-1|BAB62913.1| 2813|Homo sapiens guanine nucleotide exch... 31 5.2
>BC065040-1|AAH65040.1| 290|Homo sapiens chromosome 1 open reading
frame 63 protein.
Length = 290
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 430
R H +S F + R KSR R++R H R + R Y + +Y R R R+ GF
Sbjct: 44 RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101
Query: 431 RRFAR 445
RR+ R
Sbjct: 102 RRYYR 106
>BC041843-1|AAH41843.1| 226|Homo sapiens C1orf63 protein protein.
Length = 226
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 430
R H +S F + R KSR R++R H R + R Y + +Y R R R+ GF
Sbjct: 44 RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101
Query: 431 RRFAR 445
RR+ R
Sbjct: 102 RRYYR 106
>BC001892-1|AAH01892.1| 290|Homo sapiens chromosome 1 open reading
frame 63 protein.
Length = 290
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 430
R H +S F + R KSR R++R H R + R Y + +Y R R R+ GF
Sbjct: 44 RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101
Query: 431 RRFAR 445
RR+ R
Sbjct: 102 RRYYR 106
>AL031432-3|CAB37992.1| 290|Homo sapiens chromosome 1 open reading
frame 63 protein.
Length = 290
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 430
R H +S F + R KSR R++R H R + R Y + +Y R R R+ GF
Sbjct: 44 RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101
Query: 431 RRFAR 445
RR+ R
Sbjct: 102 RRYYR 106
>AK027318-1|BAB55038.1| 242|Homo sapiens protein ( Homo sapiens
cDNA FLJ14412 fis, clone HEMBA1004669, weakly similar to
SON PROTEIN. ).
Length = 242
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 430
R H +S F + R KSR R++R H R + R Y + +Y R R R+ GF
Sbjct: 44 RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101
Query: 431 RRFAR 445
RR+ R
Sbjct: 102 RRYYR 106
>AF267856-1|AAG44725.1| 242|Homo sapiens HT033 protein.
Length = 242
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 430
R H +S F + R KSR R++R H R + R Y + +Y R R R+ GF
Sbjct: 44 RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101
Query: 431 RRFAR 445
RR+ R
Sbjct: 102 RRYYR 106
>AF247168-1|AAG44543.1| 242|Homo sapiens NPD014 protein.
Length = 242
Score = 32.3 bits (70), Expect = 1.7
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 RQHVTTTSAFVWKRTR-KSRQRNQRHHVRPHARNYKK*NYERGR*NGFGLRHVL*LVGFA 430
R H +S F + R KSR R++R H R + R Y + +Y R R R+ GF
Sbjct: 44 RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY-RRYSR-SYSRSRSRSRSRRYRERRYGFT 101
Query: 431 RRFAR 445
RR+ R
Sbjct: 102 RRYYR 106
>AF406992-1|AAL11723.1| 2817|Homo sapiens A-kinase anchoring protein
protein.
Length = 2817
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +2
Query: 416 LVGFARRFARCVFFSRRRNVDSGGNKMSVQLRDTTVEQMRVELGNGNRKYRVKHTALLVN 595
L ++ A+ + RRR + + ++ R+ + Q E+ G + K L
Sbjct: 2588 LANLQKQQAQYLEEKRRREREWEARERELREREALLAQREEEVQQGQQDLE-KEREELQQ 2646
Query: 596 KKGTPQFEMVKTDAHYKQIQRQ 661
KKGT Q+++ + A KQ++R+
Sbjct: 2647 KKGTYQYDLERLRAAQKQLERE 2668
>AF127481-1|AAD40799.1| 893|Homo sapiens non-ocogenic Rho
GTPase-specific GTP exchange factor protein.
Length = 893
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +2
Query: 416 LVGFARRFARCVFFSRRRNVDSGGNKMSVQLRDTTVEQMRVELGNGNRKYRVKHTALLVN 595
L ++ A+ + RRR + + ++ R+ + Q E+ G + K L
Sbjct: 664 LANLQKQQAQYLEEKRRREREWEARERELREREALLAQREEEVQQGQQDLE-KEREELQQ 722
Query: 596 KKGTPQFEMVKTDAHYKQIQRQ 661
KKGT Q+++ + A KQ++R+
Sbjct: 723 KKGTYQYDLERLRAAQKQLERE 744
>AB209414-1|BAD92651.1| 1308|Homo sapiens A-kinase anchor protein 13
isoform 2 variant protein.
Length = 1308
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +2
Query: 416 LVGFARRFARCVFFSRRRNVDSGGNKMSVQLRDTTVEQMRVELGNGNRKYRVKHTALLVN 595
L ++ A+ + RRR + + ++ R+ + Q E+ G + K L
Sbjct: 1079 LANLQKQQAQYLEEKRRREREWEARERELREREALLAQREEEVQQGQQDLE-KEREELQQ 1137
Query: 596 KKGTPQFEMVKTDAHYKQIQRQ 661
KKGT Q+++ + A KQ++R+
Sbjct: 1138 KKGTYQYDLERLRAAQKQLERE 1159
>AB055890-1|BAB62913.1| 2813|Homo sapiens guanine nucleotide exchange
factor Lbc protein.
Length = 2813
Score = 30.7 bits (66), Expect = 5.2
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +2
Query: 416 LVGFARRFARCVFFSRRRNVDSGGNKMSVQLRDTTVEQMRVELGNGNRKYRVKHTALLVN 595
L ++ A+ + RRR + + ++ R+ + Q E+ G + K L
Sbjct: 2584 LANLQKQQAQYLEEKRRREREWEARERELREREALLAQREEEVQQGQQDLE-KEREELQQ 2642
Query: 596 KKGTPQFEMVKTDAHYKQIQRQ 661
KKGT Q+++ + A KQ++R+
Sbjct: 2643 KKGTYQYDLERLRAAQKQLERE 2664
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,901,088
Number of Sequences: 237096
Number of extensions: 2353236
Number of successful extensions: 9610
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9610
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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