Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120621.seq
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         23   6.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.1  

>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 626 SCKFDTGFKFIFLC 585
           SCK  T   F+FLC
Sbjct: 54  SCKQSTSLSFVFLC 67


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 253  EFNKHLLTLYHSNSLYVDVAI 191
            EFN H    YH   L  DV I
Sbjct: 1231 EFNAHTAKPYHGGFLMTDVKI 1251


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 253  EFNKHLLTLYHSNSLYVDVAI 191
            EFN H    YH   L  DV I
Sbjct: 1232 EFNAHTAKPYHGGFLMTDVKI 1252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,347
Number of Sequences: 2352
Number of extensions: 11927
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)