Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120619.seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022326-1|AAH22326.2| 59|Homo sapiens small EDRK-rich factor ... 38 0.019
BC015491-1|AAH15491.2| 59|Homo sapiens small EDRK-rich factor ... 38 0.019
AF073298-1|AAC63516.1| 59|Homo sapiens small EDRK-rich factor ... 38 0.019
BC021174-1|AAH21174.1| 62|Homo sapiens small EDRK-rich factor ... 37 0.034
AF073518-1|AAC63517.1| 62|Homo sapiens small EDRK-rich factor ... 37 0.034
BC104738-1|AAI04739.1| 110|Homo sapiens small EDRK-rich factor ... 36 0.10
BC103687-1|AAI03688.1| 110|Homo sapiens small EDRK-rich factor ... 36 0.10
BC101970-1|AAI01971.1| 110|Homo sapiens SERF1B protein protein. 36 0.10
BC093882-1|AAH93882.1| 110|Homo sapiens small EDRK-rich factor ... 36 0.10
BC093880-1|AAH93880.1| 110|Homo sapiens small EDRK-rich factor ... 36 0.10
BC035932-1|AAH35932.1| 110|Homo sapiens small EDRK-rich factor ... 36 0.10
AF073519-1|AAC63518.1| 110|Homo sapiens small EDRK-rich factor ... 36 0.10
BC105110-1|AAI05111.1| 560|Homo sapiens MST101 protein protein. 29 6.8
BC035076-1|AAH35076.2| 571|Homo sapiens MST101 protein protein. 29 6.8
AK055921-1|BAB71045.1| 455|Homo sapiens protein ( Homo sapiens ... 29 6.8
>BC022326-1|AAH22326.2| 59|Homo sapiens small EDRK-rich factor 2
protein.
Length = 59
Score = 37.9 bits (84), Expect = 0.019
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKKNAXEKTGXSLXERNPR 252
MTRGNQR+LAR KN KKQ + K K + G S R R
Sbjct: 1 MTRGNQRELARQKNMKKQSDSVKGKRRDD--GLSAAARKQR 39
>BC015491-1|AAH15491.2| 59|Homo sapiens small EDRK-rich factor 2
protein.
Length = 59
Score = 37.9 bits (84), Expect = 0.019
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKKNAXEKTGXSLXERNPR 252
MTRGNQR+LAR KN KKQ + K K + G S R R
Sbjct: 1 MTRGNQRELARQKNMKKQSDSVKGKRRDD--GLSAAARKQR 39
>AF073298-1|AAC63516.1| 59|Homo sapiens small EDRK-rich factor 2
protein.
Length = 59
Score = 37.9 bits (84), Expect = 0.019
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKKNAXEKTGXSLXERNPR 252
MTRGNQR+LAR KN KKQ + K K + G S R R
Sbjct: 1 MTRGNQRELARQKNMKKQSDSVKGKRRDD--GLSAAARKQR 39
>BC021174-1|AAH21174.1| 62|Homo sapiens small EDRK-rich factor 1A
(telomeric) protein.
Length = 62
Score = 37.1 bits (82), Expect = 0.034
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKKNAXEKTGXSLXERNPRXXNYPXXTTEKKRKS*QQR 309
M RGNQR+LAR KN KK E+ K K + S ++ ++KS Q R
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKRKEDSLTASQRKQRDSEIMQEKQKAANEKKSMQTR 60
>AF073518-1|AAC63517.1| 62|Homo sapiens small EDRK-rich factor 1,
short isoform protein.
Length = 62
Score = 37.1 bits (82), Expect = 0.034
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKKNAXEKTGXSLXERNPRXXNYPXXTTEKKRKS*QQR 309
M RGNQR+LAR KN KK E+ K K + S ++ ++KS Q R
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGKRKEDSLTASQRKQRDSEIMQEKQKAANEKKSMQTR 60
>BC104738-1|AAI04739.1| 110|Homo sapiens small EDRK-rich factor 1B
(centromeric) protein.
Length = 110
Score = 35.5 bits (78), Expect = 0.10
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKK 204
M RGNQR+LAR KN KK E+ K K
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGK 25
>BC103687-1|AAI03688.1| 110|Homo sapiens small EDRK-rich factor 1B
(centromeric) protein.
Length = 110
Score = 35.5 bits (78), Expect = 0.10
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKK 204
M RGNQR+LAR KN KK E+ K K
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGK 25
>BC101970-1|AAI01971.1| 110|Homo sapiens SERF1B protein protein.
Length = 110
Score = 35.5 bits (78), Expect = 0.10
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKK 204
M RGNQR+LAR KN KK E+ K K
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGK 25
>BC093882-1|AAH93882.1| 110|Homo sapiens small EDRK-rich factor 1A,
telomeric protein.
Length = 110
Score = 35.5 bits (78), Expect = 0.10
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKK 204
M RGNQR+LAR KN KK E+ K K
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGK 25
>BC093880-1|AAH93880.1| 110|Homo sapiens small EDRK-rich factor 1A
(telomeric) protein.
Length = 110
Score = 35.5 bits (78), Expect = 0.10
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKK 204
M RGNQR+LAR KN KK E+ K K
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGK 25
>BC035932-1|AAH35932.1| 110|Homo sapiens small EDRK-rich factor 1A
(telomeric) protein.
Length = 110
Score = 35.5 bits (78), Expect = 0.10
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKK 204
M RGNQR+LAR KN KK E+ K K
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGK 25
>AF073519-1|AAC63518.1| 110|Homo sapiens small EDRK-rich factor 1,
long isoform protein.
Length = 110
Score = 35.5 bits (78), Expect = 0.10
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKK 204
M RGNQR+LAR KN KK E+ K K
Sbjct: 1 MARGNQRELARQKNMKKTQEISKGK 25
>BC105110-1|AAI05111.1| 560|Homo sapiens MST101 protein protein.
Length = 560
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 154 LARAKNQKKQVEMQKKKNAXEKTGXSLXERNPRXXNYPXXTTEKKRKS*QQRN 312
+A+ K QKKQ E KNA K + +NP + P K ++ + N
Sbjct: 434 IAKEKAQKKQNETSTSKNAHSKVHFTRRYQNPSSGSLPPRVRLKPQRYRNEEN 486
>BC035076-1|AAH35076.2| 571|Homo sapiens MST101 protein protein.
Length = 571
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 154 LARAKNQKKQVEMQKKKNAXEKTGXSLXERNPRXXNYPXXTTEKKRKS*QQRN 312
+A+ K QKKQ E KNA K + +NP + P K ++ + N
Sbjct: 445 IAKEKAQKKQNETSTSKNAHSKVHFTRRYQNPSSGSLPPRVRLKPQRYRNEEN 497
>AK055921-1|BAB71045.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ31359 fis, clone MESAN2000501, weakly similar to
Homo sapiens DNA cytosine methyltransferase 3 alpha
(DNMT3A) ).
Length = 455
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 154 LARAKNQKKQVEMQKKKNAXEKTGXSLXERNPRXXNYPXXTTEKKRKS*QQRN 312
+A+ K QKKQ E KNA K + +NP + P K ++ + N
Sbjct: 134 IAKEKAQKKQNETSTSKNAHSKVHFTRRYQNPSSGSLPPRVRLKPQRYRNEEN 186
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,588,772
Number of Sequences: 237096
Number of extensions: 603884
Number of successful extensions: 1124
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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