Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120619.seq
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-3|AAK27862.1| 82|Caenorhabditis elegans Hypothetical ... 43 1e-04
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 30 1.1
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 30 1.1
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 30 1.1
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 30 1.1
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 30 1.1
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 30 1.1
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 30 1.1
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 30 1.1
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 30 1.1
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 30 1.1
Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical pr... 29 1.4
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 27 5.7
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 27 5.7
>AC087079-3|AAK27862.1| 82|Caenorhabditis elegans Hypothetical
protein Y37E3.4 protein.
Length = 82
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 130 MTRGNQRDLARAKNQKKQVEMQKKKNAXEKTG 225
MTRGNQRDLAR KNQKK + +K++ A + G
Sbjct: 1 MTRGNQRDLAREKNQKKLADQKKRQGASGQDG 32
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 488 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 547
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 548 ESINSTTQLLIDCILFV 564
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 469 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 528
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 529 ESINSTTQLLIDCILFV 545
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 525 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 584
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 585 ESINSTTQLLIDCILFV 601
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 479 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 538
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 539 ESINSTTQLLIDCILFV 555
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 479 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 538
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 539 ESINSTTQLLIDCILFV 555
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 479 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 538
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 539 ESINSTTQLLIDCILFV 555
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 488 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 547
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 548 ESINSTTQLLIDCILFV 564
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 479 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 538
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 539 ESINSTTQLLIDCILFV 555
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 469 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 528
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 529 ESINSTTQLLIDCILFV 545
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +1
Query: 163 AKNQKKQVEMQKKKNAXEKTGXSLXERNP---RXXNYPXXTTEKKR---KS*QQRNIISK 324
+KN+K V++ +KN +K +L NP R ++ + R K + +ISK
Sbjct: 525 SKNEKGWVKVICEKNRVDKETFALLPVNPDEVRDLDFANDACKALRNFIKLIKIGQVISK 584
Query: 325 QRINSHIXEILDCSIFI 375
+ INS ++DC +F+
Sbjct: 585 ESINSTTQLLIDCILFV 601
>Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical
protein F19C6.2b protein.
Length = 449
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 139 GNQRDLARAKNQKKQVEMQKKKNAXEK 219
GN+ D + AK KKQV +KK+NA K
Sbjct: 301 GNEDDSSNAKYAKKQVFKKKKRNAFGK 327
>Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical
protein F19C6.2a protein.
Length = 495
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 139 GNQRDLARAKNQKKQVEMQKKKNAXEK 219
GN+ D + AK KKQV +KK+NA K
Sbjct: 347 GNEDDSSNAKYAKKQVFKKKKRNAFGK 373
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 142 NQRDLARAKNQKKQVEMQKKKNAXEK 219
NQ + AK Q+++VEM+KK+ E+
Sbjct: 368 NQEEAWEAKMQEREVEMEKKRKILEE 393
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 142 NQRDLARAKNQKKQVEMQKKKNAXEK 219
NQ + AK Q+++VEM+KK+ E+
Sbjct: 370 NQEEAWEAKMQEREVEMEKKRKILEE 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,616,372
Number of Sequences: 27780
Number of extensions: 109594
Number of successful extensions: 299
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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