Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120615.seq
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.25 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.34 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.5  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.6  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 196 SHPVHVAGYCLTIINITEDPTRS 128
           SHP H+ GY   +I I   P ++
Sbjct: 594 SHPFHLHGYAFNVIGIGRSPDQN 616


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 196 SHPVHVAGYCLTIINITEDPTRS 128
           SHP H+ GY   ++ I   P ++
Sbjct: 594 SHPFHLHGYAFNVVGIGRSPDQN 616


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 259 QIALIHDLAECIVGDLT-PHCGVSPEEKHRREDEAMK 366
           Q+A+     E  V DL+ P C  + E+K RR+  A K
Sbjct: 388 QLAVGGSQEESRVLDLSKPGCSYTGEQKSRRKGPAFK 424


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +3

Query: 357 GHEDNFRTNWNCW 395
           GHE +    W CW
Sbjct: 107 GHETSCTRYWTCW 119


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 304 LTPHCGVSPEEKHRRE 351
           L   CGV  +E HRR+
Sbjct: 256 LVEACGVLQQEPHRRD 271


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 304 LTPHCGVSPEEKHRRE 351
           L   CGV  +E HRR+
Sbjct: 256 LVEACGVLQQEPHRRD 271


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 298 GDLTPHCGVSPEEKHRREDEAMKT 369
           G + PH G+SP   H     A+ T
Sbjct: 228 GLIPPHPGLSPHPPHLSSHPAIVT 251


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 298 GDLTPHCGVSPEEKHRREDEAMKT 369
           G + PH G+SP   H     A+ T
Sbjct: 120 GLIPPHPGLSPHPPHLSSHPAIVT 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,806
Number of Sequences: 336
Number of extensions: 3400
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)